Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05148 ATGGAGTACAAAATTAGCTTCCAGCTTTCAGTAGTAGTAGTAGTGTTTGTTTTGCTTGGTGTTGCTGTGCATGGCAATGGGGAAGGGACGTGTGTAGGGTTCTATTCTCGTACATGCCCTCGCGTTGAGTCAATTGTGAGGTCTACAGTAGAATCCCACGTAAGGTCTAACCCTAGTCTTGCAGCTGGGTTGCTTAGGATGCACTTCCATGATTGCTTTGTGAGAGGTTGTGACGCTTCAGTTCTCATTGCCGGTACTGGCACTGAGAGAGAAGCAGGGCCTAACCGTAATTTAAAAGGATTTGAGGTTATTGATGATGCAAAGGCAAAACTCGAGGCTGAATGCCCTGGCGTTGTCTCTTGTGCTGATATCCTTACCCTTGCTGCACGTGATTCCGTTGTTCTGAGTGGTGGACAAAGTTGGGCAGTGCCTACAGGACGTAGAGATGGAAGGGTATCAATTGGGAGTGAAAGTCTAGTCTTGCCAGGTCCTAATGATTCCGTTGCAATTCAGAAGCAGAAGTTTGCTGATCAGGGTCTTAACGCTCAAGACCTCGTCATTCTTGCCGGTGGGCATACAATTGGCACTACTGCTTGCCAATTCTTCGCGGACAGAATATACAACTCTGCAAATGGCACAGATCCTTCGATCGACCCAGCATTTGTTCCAACTCTGCGACAAATTTGCCCCCAAAACCAACCAACGAAGCGAGTTGCACTTGACACTGGAAGCCAATTCAAATTCGACACTTCTTACTTTGCTAACCTCAAGAAAGGCCACGGAGTTCTTCGTTCTGATCAGGTGCTTTGGACGGATCCTTCCACAAGGATCATTGTTCAGAGATTCTTAGCCACCGGTCCCTTCAATGTCGAATTTGGCAGGTCTATGGTCAAGATGGCCAATATTGGTATCAAGACTGGTTCTAATGGCGAAATTCGCAAGAGATGTTCATTAATTAATTTAATTACACTGCATTTAATTTGCAAAATAATGGAGGGTAGTAATTTGTTTAAGGTTGTGTTTCTTTTGCTTATTGCTTTGGCTACTGTCCATGGGCAAAAAGGGACGCGTGTAGGGTTCTATTCAAGTTCATGTCCTCGCGCTGAATCCATTGTTAGGTCCACAGTTCAATCTCACGTTAACTCTGATCCTACTCTGGCCGCTGGGTTACTTCGGATGCACTTCCATGACTGCTTTGTGCAAGGCTGTGACGCTTCTGTTCTCATTGCTGGCGATGGCACTGAGAGAACAGCACCTGCAAACCTTGGTTTAAGAGGATTTGAGGTCATCGATGATGCAAAGACACAGATCGAAGCTGCATGCCCTGGTGTTGTCTCTTGTGCTGATATCCTTGCCCTTGCTGCCCGTGATTCTGTTGTTCTGAGTGGTGGACTGAGTTGGCAAGTGCCAACTGGACGCAAAGATGGCCGCGTGTCACGTGCTTCGGATGCGAATAACTTGCCTGCCCCTAATGACTCTGTTGATGTCCAGAAACAGAAATTCTCAGCTAAGGGCCTCAATACTCAAGACCTCGTCACCCTCGTTGGTGGACATACCATTGGTACTACAGCTTGCCAGTTCTTCCGTGACAGATTATACAACTTCACTGCCAACGGTGCTGATCCTTCCATTGATCCTTCATTTCTTCCTCAACTACGAGCACTCTGCCCTCAGAACAGTGGCGGTTCAAACCGAGTTGCGCTGGATAACGGTAGTCAAAACAAATTTGATACATCTTACTTTTCTAATTTGAGGAACGGTCGTGGAATTCTGGAGTCTGATCAGGCGCTTTGGAACGATGCTTCCACAAAGAGCTTTGTACAGAGGTACTTGGGCTTGAGAGGCTTGCTTGGATTAACATTCAATGTCGAATTTGGAAAGTCTATGGTGAAGATGAGCAACATTGGGGTCAAGACCGGTGCTGATATTGTTTTGGTTGCTGTGGCTGTTGATAACAAATTAGTGCATGGTCAAGGCTCGCGTGTAGGTTTCTATTCGTCTACATGTCCTCGCGCTGAGTCCATTGTTAAATCCACAGTTGAATCCCACGTTAAATCTGACCCTACATTTGCTGCTGGGTTACTTAGGATGCACTTCCACGATTGCTTCGTGAGAGGTTGTGATGCTTCTGTTCTCATTGCTGGCGCTGGCACTGAGAGAACAGCATTTGCAAATCTTGGTTTGAAAGGATTTGAGGTCATTGATGATGCCAAGGCAAAGCTCGAGGCTGCCTGCCCTGGTGTTGTCTCATGTGCTGACATCCTTGCCCTTGCTTCACGTGATGCCGTTGTTCTGAGTGGTGGAGTGAGTTGGCAAGTTCCTACTGGACGCAGAGATGGGCGCGTGTCACAGGCTTCAGAGGTCAACGATTTGCCTGGCCCTTCTGACTCTGTTGCTGTACAGAAACAAAAATTTGCAGCAATGGGTCTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGGCATTCCATTGGTACAACAGCTTGCCAATTCTTGAGGAACAGATTGTACAACTTCACTGCAAATGGTGCTGATCCTTCCATCGACGCTTCATTTCTTCCCCAACTACAATCACTCTGCCCCCAAAACAGTGGCGCTTGA 2601 0.4717 MEYKISFQLSVVVVVFVLLGVAVHGNGEGTCVGFYSRTCPRVESIVRSTVESHVRSNPSLAAGLLRMHFHDCFVRGCDASVLIAGTGTEREAGPNRNLKGFEVIDDAKAKLEAECPGVVSCADILTLAARDSVVLSGGQSWAVPTGRRDGRVSIGSESLVLPGPNDSVAIQKQKFADQGLNAQDLVILAGGHTIGTTACQFFADRIYNSANGTDPSIDPAFVPTLRQICPQNQPTKRVALDTGSQFKFDTSYFANLKKGHGVLRSDQVLWTDPSTRIIVQRFLATGPFNVEFGRSMVKMANIGIKTGSNGEIRKRCSLINLITLHLICKIMEGSNLFKVVFLLLIALATVHGQKGTRVGFYSSSCPRAESIVRSTVQSHVNSDPTLAAGLLRMHFHDCFVQGCDASVLIAGDGTERTAPANLGLRGFEVIDDAKTQIEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRKDGRVSRASDANNLPAPNDSVDVQKQKFSAKGLNTQDLVTLVGGHTIGTTACQFFRDRLYNFTANGADPSIDPSFLPQLRALCPQNSGGSNRVALDNGSQNKFDTSYFSNLRNGRGILESDQALWNDASTKSFVQRYLGLRGLLGLTFNVEFGKSMVKMSNIGVKTGADIVLVAVAVDNKLVHGQGSRVGFYSSTCPRAESIVKSTVESHVKSDPTFAAGLLRMHFHDCFVRGCDASVLIAGAGTERTAFANLGLKGFEVIDDAKAKLEAACPGVVSCADILALASRDAVVLSGGVSWQVPTGRRDGRVSQASEVNDLPGPSDSVAVQKQKFAAMGLNTQDLVTLVGGHSIGTTACQFLRNRLYNFTANGADPSIDASFLPQLQSLCPQNSGA. 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05148 866 FunFam Peroxidase 359 499 - -
Seca6g05148 866 SUPERFAMILY Heme-dependent peroxidases 357 642 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Seca6g05148 866 ProSitePatterns Peroxidases proximal heme-ligand signature. 510 520 IPR019793 -
Seca6g05148 866 SUPERFAMILY Heme-dependent peroxidases 32 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 CDD secretory_peroxidase 661 865 IPR033905 GO:0004601|GO:0042744
Seca6g05148 866 Gene3D - 33 320 - -
Seca6g05148 866 Gene3D - 661 809 - -
Seca6g05148 866 Pfam Peroxidase 372 610 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 Pfam Peroxidase 46 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 Pfam Peroxidase 676 862 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 ProSitePatterns Peroxidases active site signature. 691 702 IPR019794 GO:0004601
Seca6g05148 866 Gene3D - 359 641 - -
Seca6g05148 866 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Seca6g05148 866 FunFam Peroxidase 162 299 - -
Seca6g05148 866 ProSiteProfiles Plant heme peroxidase family profile. 355 673 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 Gene3D Peroxidase, domain 2 488 632 - -
Seca6g05148 866 ProSiteProfiles Plant heme peroxidase family profile. 29 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 CDD secretory_peroxidase 32 319 IPR033905 GO:0004601|GO:0042744
Seca6g05148 866 PANTHER PEROXIDASE 25-RELATED 343 640 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 FunFam Peroxidase 663 803 - -
Seca6g05148 866 FunFam Peroxidase 33 167 - -
Seca6g05148 866 ProSitePatterns Peroxidases proximal heme-ligand signature. 814 824 IPR019793 -
Seca6g05148 866 CDD secretory_peroxidase 357 642 IPR033905 GO:0004601|GO:0042744
Seca6g05148 866 ProSiteProfiles Plant heme peroxidase family profile. 669 866 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 ProSitePatterns Peroxidases active site signature. 387 398 IPR019794 GO:0004601
Seca6g05148 866 MobiDBLite consensus disorder prediction 776 795 - -
Seca6g05148 866 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Haem peroxidase superfamily signature 569 584 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 Gene3D Peroxidase, domain 2 162 299 - -
Seca6g05148 866 SUPERFAMILY Heme-dependent peroxidases 661 865 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 365 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 425 438 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 444 454 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 583 600 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 463 478 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 509 521 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 567 582 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 389 409 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 PRINTS Plant peroxidase signature 627 640 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05148 866 FunFam Peroxidase 488 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05148 Seca-Chr6 118587085 118596952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05148 643 863 Peroxidase AT2G41480 64.414 4.74e-95 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05148 - K00430 tcc:18603412 506.523