Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05144 ATGGCGGAGGAGAGAGAGGAGATCAATGGCGGACGCGGATTCTCGATGGACTCGACGGAATCACGGTGGGTTATCCAGGAGGAGGATGAAGATGCATCGGATATAGAGGATTACGATGCCGATTTGAGACTGAGAGGGCACGCTAGTGTACTGGATTCGGAAGAGGATGAGGAAAACGCGGAGCAGAAACTCGTTCGCACTGGACCTCGAATCGATTCCTTCGATGTCGAGGCTCTTGAGGTCCCCGGTGCTTTTAGAAATGACTATGAGGATATCAGTGTGGGAAAGAAAATTGTATTGGCTTTTCAGACTCTTGGTATTGTCTTTGGTGATGTTGGAACGAGTCCATTATATACATTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTACACTTTAATCTTGATTCCTTTATTGAAGTATGTCCTGGTTGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTATTCCTTGATTTGTCGTCATGCTAAGGTGAGTCTTCTCCCCAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTAAAGGTGCCATCCCCTGAGCTTGAAAGGTCGTTAAAAATCAAGGAAAGACTTGAGTCTTCTCTGACTCTGAAGAAGACTATACTAATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAACGGTGTTGTTACACCAGCAATGTCAGTATTGTCATCTGTGGGTGGTTTAAAAGTTGGGGTAGATGCAATCAAGCAAGATGAAGTGGTGATGATTTCAGTTGCCTGCCTAATCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTAGGACTTGCCGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCGGGCATCGGGATATACAATCTTGTCAAATATAACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATCTACTACTTCTTCAAGAGGAACTCAACAAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCTACTTTTCTGTTCGATCAGTTCAGCTTACATTTGTCTTTCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAATATTGCTGCACTGATTGCAAGTCGGGCTATGACAACAGCAACGTTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATCATTCATACCTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTTCTTAACTGGTTTCTCTTGGCTGTTTCTCTGGTGCTTGTCTGCTCTATATCCAGCATTGATGAGATTGGAAATGCCTATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTCATATGGCAGCTACACATCATCATAGTGCTGAGTTTCTTGGTAGTATTTTTGGGATTGGAGTTGACTTTCTTTTCATCTGTTTTGTGGAGTGTGACAGATGGAAGTTGGATAATATTGGTCTTTGCAGTAATAATGTTTTTTATAATGTATGTATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAACAGAAACTGTCAATGGATTTGATGCGAGAATTAGGTTGTAATCTGGGGACAATACGAGCTCCTGGGATTGGTTTGCTGTATAATGAGTTGGTCAAAGGAATACCAGCAATTTTTGGACATTTTCTGACTACACTTCCAGCAATACACTCCATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTCCTGTGGTGCCTCAAAGTGAGAGGTTCCTTTTCCGGCGAGTCTGCCCAAAAAGTTACCACATATTTCGTTGCATTGCCAGGTATGGTTACAAAGATGTACGAAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAGGAGAGGTCACTGGAGAGTGATGGGGATGAAGATACTGATTCAGAGGATGCTTACTCTGGTTCTAGGGTACTCATAGCTCCCAATGGGAGTGTTTACTCACTTGGTGTTCCCCTTCTGGCTGATTTTAAGGATACAATCAACCCTGTTTTAGAAGCAAGCACGTCAGAGGTGGAAAGCCTGGGGTCCCCTAATGCCCCAGTGTTTGATGCTGAGCAGAGCCTTGAGAGGGAGTTATCTTTTATTCACAAAGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATTAGGGCAAGGAAGGACTCATGGTTTATCAAGAAGCTACTTATAAACTATTTTTATGCCTTTTTGAGGAAGAACTGCAGAAGGGGGATCACGACTTTAAGTGTACCTCACTCACATCTGATGCAAGTTAGCATGACTTACATGGTTTGA 2541 0.4246 MAEEREEINGGRGFSMDSTESRWVIQEEDEDASDIEDYDADLRLRGHASVLDSEEDEENAEQKLVRTGPRIDSFDVEALEVPGAFRNDYEDISVGKKIVLAFQTLGIVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLESSLTLKKTILILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIKQDEVVMISVACLIILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYNSSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVSLVLVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIIVLSFLVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMYVWNYGSNLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDEDTDSEDAYSGSRVLIAPNGSVYSLGVPLLADFKDTINPVLEASTSEVESLGSPNAPVFDAEQSLERELSFIHKAKESGVVYLLGHGDIRARKDSWFIKKLLINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV. 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05144 846 Pfam K+ potassium transporter 101 674 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca6g05144 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 96 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca6g05144 846 MobiDBLite consensus disorder prediction 1 35 - -
Seca6g05144 846 NCBIfam potassium uptake protein 100 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05144 Seca-Chr6 118558495 118565588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05144 2 846 Inorganic Solute Cotransporters AT5G09400 79.064 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05144 - - gmx:100788008 1476.07