Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05108 ATGGTTAAGGCTCATAAGTCTTTGCCTTGCCCACAGCATGTGGCTTGGCCATCGCTTGATTTAAATTGTGCCTGCACATTGCCGGAGCCCAGTTTGTATGGCCATTCAGCATATCTGAATCCTAGCACATGTATTTTTCCTGCTGTCAGTGGATTTCCAGGATTCACAGCTCCTACTACCCCAAGCCTGAAGACTAAGCAGACCAATGAAGTGCAAGGATTCCTTCAGTATCCCAATTCAAAACCATGTCTGGAAGGAATACATACTGGAGGGGCTATGCAAAATGCTACTCCTGCATCTTTTCAGAAGAAGTTACTTATTTTTGACCATTCTGGTAATAAGACAAGGTTGTTTTATAGTCCTGTCTTCCCTCTTGTCCAAAGTCCAGTTGTTACTGGTAGGCAATTTGCTCAAGCTTATGATGTAAATGAGGGAGGACAGGCAACTAATATTGGTCAAAACCATTTCCTGAAATACAGTTTACCTGAAGATTCAGATAAGGATCATGTAGTAAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTCTGATTCTGGTTCTGATGGTGATGACGATGATGATGATGAGGTAGCAAGTAGAGGCCATTCTCCATTGGCTACTAAAAGGACTTACGTGATGCAAGAACCATTTGAGGATACAAAGGAGGAGGTTGATAGCACTGATTGGCCAAACAAAAGGCATAAGTTAATTGATGGTGGACACAAAAGATTACAACCACCTGCGGACAGTGCTAGCTCAGTAAGAGTATATGAAAGCTGTGAGTATGTCAGTGATGCTGAATCGAAGTATTCTAGTAGCCAAGTGTATTCTGCCAGGCAAACTGAAGATAATTCAATAGTTGGTGATGTTCAATTGAAAAAGGATAAAATCCGTGAATCATTGAGAGTTCTTGAGAACATAATTCCTGGAGCAAAAGGAAAGCATCCTCTGTTAATCATTGATGGAACTATTGATTACTTAAAATCTTTGATGTCCCAAACTGGTTCAATTGGGGTGAACTATCACTAA 1059 0.4032 MVKAHKSLPCPQHVAWPSLDLNCACTLPEPSLYGHSAYLNPSTCIFPAVSGFPGFTAPTTPSLKTKQTNEVQGFLQYPNSKPCLEGIHTGGAMQNATPASFQKKLLIFDHSGNKTRLFYSPVFPLVQSPVVTGRQFAQAYDVNEGGQATNIGQNHFLKYSLPEDSDKDHVVNEESEMHEDTEEINALLYSDDSDSGSDGDDDDDDEVASRGHSPLATKRTYVMQEPFEDTKEEVDSTDWPNKRHKLIDGGHKRLQPPADSASSVRVYESCEYVSDAESKYSSSQVYSARQTEDNSIVGDVQLKKDKIRESLRVLENIIPGAKGKHPLLIIDGTIDYLKSLMSQTGSIGVNYH. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05108 352 PANTHER TRANSCRIPTION FACTOR BHLH145 10 350 IPR037546 -
Seca6g05108 352 MobiDBLite consensus disorder prediction 189 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05108 Seca-Chr6 118294482 118296523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05108 83 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 37.544 6.77e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05108 - - gmx:100778385 473.781