Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05080 ATGCATTGCTCTTCATCCCATGCAGTAGTTGAGGTCAATGTAAATTGGCTGCTTAACTATTGTCTTCAGTCCAATATTGGAGCCAAAAATCATGCTGTCATAATGCCTGATGCAAGAGAGGATGCTACTTTGAAAGCTCTAGTTACAGCTGGTTTTGGTGCTGCTGGACAGAAATGCACAACACTCAGTGCTGTTATTTTCGTTGGAAGTTTCAAACAATGGGAAGATAAACTAATAGAGCGTGCCAGAGCACTTAAGGTCAATGCTGGAACAGAACCAGACACAGACCTCGGTCCAGTTATCAACAAACAGGCAAAGGAACACACTTGCAGATTGATTCAAAAAGGTGTAGAATCTGGTGCAAAACTAGTGCTTGATGGCCGAAACATTGTGGTTCCAGGATATGAACATGGAAACTTCATTGGTCCCACCATCTTATCTGATGTCACAATTGACATGGAATGCTACAAGGAGGAGATTCTTGGCCCAGTTCTTCTGTGTATGGAGGTTGACAGAATGCAAGAAGCCATAAATATCGTCAACAGCAACAAATATGGTACTGGAGCTTCCATTTTTACAACTTCAAGTGCAGCTGCAAGAAAATTCCAGACTAAGGTTGAAGTTGGTCAGGTTGGCATAAATGTCCCCATCTCTGTTTCGTTGCCCTTTTCTTCCTTCATTAGCTCCAGGCCATCTTTTGTTGGTGATTTGAATTTTGATGGCAGAGCTGGAATTCTGTTTTACACGCAGATTAAGACTGTTACTAAACAATGGGCAGACTCATTAGACGGAGATGAAACTCCTCTTGAAATGCGTTGTGCTTAG 825 0.4218 MHCSSSHAVVEVNVNWLLNYCLQSNIGAKNHAVIMPDAREDATLKALVTAGFGAAGQKCTTLSAVIFVGSFKQWEDKLIERARALKVNAGTEPDTDLGPVINKQAKEHTCRLIQKGVESGAKLVLDGRNIVVPGYEHGNFIGPTILSDVTIDMECYKEEILGPVLLCMEVDRMQEAINIVNSNKYGTGASIFTTSSAAARKFQTKVEVGQVGINVPISVSLPFSSFISSRPSFVGDLNFDGRAGILFYTQIKTVTKQWADSLDGDETPLEMRCA. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05080 274 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 254 IPR016162 GO:0016491
Seca6g05080 274 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 22 263 IPR010061 GO:0004491
Seca6g05080 274 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 30 223 IPR016163 GO:0016620
Seca6g05080 274 SUPERFAMILY ALDH-like 26 259 IPR016161 GO:0016491
Seca6g05080 274 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 27 227 - -
Seca6g05080 274 Pfam Aldehyde dehydrogenase family 24 254 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05080 Seca-Chr6 118059052 118064978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05080 22 254 Aldehyde Dehydrogenase Gene Family AT2G14170 67.811 6.06e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05080 K00140 - cave:132177147 371.318