Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05079 ATGTCAGGGGCAGCTGTGATGCTGGCAGAGTTAGCAATAGAGGCTGGTATACCTAATGGTGTGTTGAATATTGTTCATGGTACAAATGACATTCTCAATGCTATCTGTGATGATGATGATGATATAAAAGCTGTCTCCTTTGTTGGTTCAGATACAGTTGGTGCTTATGTATACACAAGAGCATCTACTAAAGGTAAACGTGTCCAGGTAATTTCTCTGCGTCTGCTCTGGTAG 234 0.4145 MSGAAVMLAELAIEAGIPNGVLNIVHGTNDILNAICDDDDDIKAVSFVGSDTVGAYVYTRASTKGKRVQVISLRLLW. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05079 77 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 72 IPR016162 GO:0016491
Seca6g05079 77 SUPERFAMILY ALDH-like 4 69 IPR016161 GO:0016491
Seca6g05079 77 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 3 70 IPR010061 GO:0004491
Seca6g05079 77 Pfam Aldehyde dehydrogenase family 5 69 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05079 Seca-Chr6 118057907 118059025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05079 3 69 Aldehyde Dehydrogenase Gene Family AT2G14170 71.642 2.28e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05079 K00140 - tcc:18608183 101.293