Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05074 ATGGGAATCATTTTCTTGCTCCATATGATTACTTTGGTAAATACACTTTCATTTCATTACCAAGGCTTTCAGAATGATGATGCCATACTAGAAGGAGATGCTTCTCTGTGGCGTTCAGTAATCCAACTCACTGTGACCTCAAGGTACCAAAGCAATGCTTACAGTGTTGGGCGAGTCAAAGGTCTTGAGTCATTGCACCTGTGGGAGTGGGAAATGGGCTCAAGAAAAAAACTCACTGACTTCTCTACCCAATTTTCCTTTGAAATTTTCTCAAATCAGACTAGTTTTGGAGATGGCTTGGCATTTTTCCTTGCAGATCCAGAGCTGCCACTTTTAAGGAGAATACAAGAAGGAGGTGGTCTTGGTTTGGTGGATGGTAACCAAGAATCAAACTCAACTAAACATTCATTTGTAGCAGTGGAGTTTGACACACACACAAATCCATGGGATCCACCAGGCACTCATGTAGGTATAAACTTGAACTCTATGACATCTCACAAAACTGTGCCATGGTTGGTTGATATTAGGCAAATGAAAGTTTATTATTGTAGAATTGAGTACAGTGCCAGTACTCATAATTTGGAAGTTACTTTCACTGGAAACAAAGATGTTGATTTGAGTGATTACCTACCAGAGTGGGTTATTTTTGGTTTTTCAGCTGCTACAGGAGATAATTTTGAGATGAATACATTGTGGTCATGGTCATTCAATTCAAGTGCTAAAATTAGTCCTGAGAAAAAGAGCAAAAAAGGACTACTGGTAGGGCTAGGAGTTGGTTTAGGCATGGCTGCAATTTTCCTTATTTTAGGGTTGGTTTGTATTTTAATGTGGAAAAGGGCTAAAGGGAAAAAAGAAGATTCATTTTCTGACCTGAAAATGGATGATGAATTCCAAAAAGGCACTGGACCCAAGAGGTTTTGCTATAACCAATTGGTAAGTGCAACAAATAACTTTGCAGAAGCTCAAAAGATTGGACAAGGTGGATTTGGGGGTGTTTATAAAGGCTATTTGAAAGACTTGAACTCCTATGTTGCTATAAAGAGGATATCAAGAGAGTCTAGGCAGGGGATAAAGGAATATGCATCTGAAGTGAAAATCATTAGCCAACTGAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGCCATAGGAAGAAAGATCTCCTCCTCATATACGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATCATGGAAAAAGCATCTTGACATGGCACATGAGGTACAACATTGCTATGGACTTGGCTTCAGCACTTTTGTATCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAACCCAGCAACATTATGTTGGACTCCAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGTTGGTGGATCATGAGAAAGGATCACAAACTACAGTTATAGCAGGGACAAGGGGCTACATAGCTCCTGAATATTTCACTACAGGGAAGGCTAAGAAAGAATCTGATATATACAGTTTTGGAATTGTTTCATTGGAGTTAGCCAGTGGAAGAAAACCAATTGACCTTAATGCCACTGAGGGTCAAATAACCATATTTGAGTGGGTTTGGGAGCTTTATAGATTAGGACGGTTCCTTGAAGCAGTGGACACAAAACTTGGGGAAGCATTTGATAAGGAACAGATGGAACGTTTAGTGGTTGTTGGTCTTTGGTGTGCCAATCCAGATTATTCATTCAGGCCATCTATAAGGCAAATGATTCAAGTGCTTAAACTTGAAGCTCCTTTACCAGTTCTCCCCCAGAAGATAACTGATCCAACTTACCATCCTCCAACAATGAGTTCAATCTTTGATTCAGTTTCTTCTCCCTCTCCCCACAAGGACTCAAGAAAGCTCACTGACTTCACTTCCAATTTTTCCTTCATGATCAATCAACCAAACAAAACCCAACTTGGAGATGGCATCACATTCTTCCTTGCCAGCCCAAACTTTCCACTTCCTGTCCCTCCAGATGGAACTGGTATTGGCCTTGTAGGACGTCAACAAATGCAAGATCCAAATTATCCAAATGACCATCCATTTGTTGCAGTGGAATTTGACACTTTTCCAAATAGGTTTGATCCTCCATATGACCATGTAGGTATCAATATCAAAACTGTGAGAAGTCCTTTCACTACAGAATGGTTTAGTATTTTGGATGGGATTGATTTGAGAGAGGTCCTACCAGATTGGGTTCAGTTTGGCTTCTCTTCAAGCATTGGAGCAGGTTTTTTAATTGTTGGTTTGGGATTAGCTTGGCTTTTGATGTTGAAGATGAGAAGAGGGGAGGAAGATGACTTGGATCTTACTATGGACAATGATTTTGAAAAAGGGACTGGTCCTAAGAAGTTTTCCTATAATGAACTTGTTAGAGCAACTCACAGCTTTGCAAAGGAGCAGAAGCTTGGAGAAGGAGGTTTTGGGGAAGTTTACAAGGGATTTATAAGAGACTTGGATGACTATGTTGCAGTTAAAAGGATATCAAGAGGATCTAGACAGGGTGTGAAAGAGTATGTCTCTGAAGTAAAGATCATTAGTCAACTGAGGCATAGGAATTTGGTGCAGCTCATAGGATGGTGCAACAAGAAAAATGATCTTCTACTCATCTATGAGTTCATGTCAAATGGAAGCCTTGATTCCCATCTGTTTGGAGGCAAAAGCCTTCTGACATGGGGAGCAAGATATAACATTGCTGGAGGCCTAGCCTCAGCATTATTGTACCTACATGAAGAATGGGAGCAATGTGTGATTCATAGGGACATAAAATCAAGTAATGTAATGTTGGATTCAAATTTCAATGCTAAGCTTGGAGACTTCGGATTAGCCAGATTGTTGGATCATGACAAAGGGTCACAAACAACAGTTTTAGCTGGAACAATGGGATATTTGGCTCCTGAATCTGCCACCAGAGGCAAGGCTAGTAGAGAGTCTGATGTATACAGTTTTGGTATTGTTACTTTGGAGATAGCTTGCGGAAGAAAGCCAATTGAAGTAAAAGCCAGTGAAGAACAAGTCCTTATGGTGGAATGGGTTTGGAAACTTTATGGGATGGGTAATCTATTAGAAGCAGCTGATGCAAGACTGTGTGGAGAGTTTGATGAGCAAGAAATGGAAAGGTTAATGATAGTTGGGCTATGGTGTGCTCACCCAGATTACACTTTGAGGCCTACAATGAGGCAAGCAGTTCAAGTACTTTACTTTGAAGCTCTATTACCCATTCTCCCATCAAATATGCCAAAACCCACCTACACTATTCCTTCATTTACTGAATCTGCGCCTTCAAGTTCTTCATCGTCTAGTGTTTATGCTTTTAGACTTACTCAAACAGAGCCTTCATCCAGTAGCTCATCACAATCCAACGCATCTGCCGCACTTCTGCGTACATACTAA 3420 0.405 MGIIFLLHMITLVNTLSFHYQGFQNDDAILEGDASLWRSVIQLTVTSRYQSNAYSVGRVKGLESLHLWEWEMGSRKKLTDFSTQFSFEIFSNQTSFGDGLAFFLADPELPLLRRIQEGGGLGLVDGNQESNSTKHSFVAVEFDTHTNPWDPPGTHVGINLNSMTSHKTVPWLVDIRQMKVYYCRIEYSASTHNLEVTFTGNKDVDLSDYLPEWVIFGFSAATGDNFEMNTLWSWSFNSSAKISPEKKSKKGLLVGLGVGLGMAAIFLILGLVCILMWKRAKGKKEDSFSDLKMDDEFQKGTGPKRFCYNQLVSATNNFAEAQKIGQGGFGGVYKGYLKDLNSYVAIKRISRESRQGIKEYASEVKIISQLRHRNLVQLIGWCHRKKDLLLIYEFMQNGSLDSHLYHGKSILTWHMRYNIAMDLASALLYLHEEWEQCVLHRDIKPSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTVIAGTRGYIAPEYFTTGKAKKESDIYSFGIVSLELASGRKPIDLNATEGQITIFEWVWELYRLGRFLEAVDTKLGEAFDKEQMERLVVVGLWCANPDYSFRPSIRQMIQVLKLEAPLPVLPQKITDPTYHPPTMSSIFDSVSSPSPHKDSRKLTDFTSNFSFMINQPNKTQLGDGITFFLASPNFPLPVPPDGTGIGLVGRQQMQDPNYPNDHPFVAVEFDTFPNRFDPPYDHVGINIKTVRSPFTTEWFSILDGIDLREVLPDWVQFGFSSSIGAGFLIVGLGLAWLLMLKMRRGEEDDLDLTMDNDFEKGTGPKKFSYNELVRATHSFAKEQKLGEGGFGEVYKGFIRDLDDYVAVKRISRGSRQGVKEYVSEVKIISQLRHRNLVQLIGWCNKKNDLLLIYEFMSNGSLDSHLFGGKSLLTWGARYNIAGGLASALLYLHEEWEQCVIHRDIKSSNVMLDSNFNAKLGDFGLARLLDHDKGSQTTVLAGTMGYLAPESATRGKASRESDVYSFGIVTLEIACGRKPIEVKASEEQVLMVEWVWKLYGMGNLLEAADARLCGEFDEQEMERLMIVGLWCAHPDYTLRPTMRQAVQVLYFEALLPILPSNMPKPTYTIPSFTESAPSSSSSSSVYAFRLTQTEPSSSSSSQSNASAALLRTY. 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05074 1139 CDD lectin_legume_LecRK_Arcelin_ConA 16 239 IPR001220 GO:0030246
Seca6g05074 1139 PANTHER - 47 591 - -
Seca6g05074 1139 ProSitePatterns Legume lectins alpha-chain signature. 738 747 IPR000985 -
Seca6g05074 1139 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Seca6g05074 1139 ProSitePatterns Legume lectins beta-chain signature. 692 698 IPR019825 -
Seca6g05074 1139 ProSitePatterns Protein kinases ATP-binding region signature. 324 347 IPR017441 GO:0005524
Seca6g05074 1139 SUPERFAMILY Concanavalin A-like lectins/glucanases 607 751 IPR013320 -
Seca6g05074 1139 Gene3D Phosphorylase Kinase; domain 1 303 394 - -
Seca6g05074 1139 Gene3D Phosphorylase Kinase; domain 1 791 882 - -
Seca6g05074 1139 Pfam Protein kinase domain 807 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 Pfam Protein kinase domain 319 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 ProSiteProfiles Protein kinase domain profile. 318 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 FunFam L-type lectin-domain containing receptor kinase IX.1 303 394 - -
Seca6g05074 1139 FunFam Lectin-domain containing receptor kinase A4.3 883 1095 - -
Seca6g05074 1139 FunFam Lectin-domain containing receptor kinase A4.3 395 607 - -
Seca6g05074 1139 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 243 IPR013320 -
Seca6g05074 1139 Gene3D Transferase(Phosphotransferase) domain 1 395 606 - -
Seca6g05074 1139 Gene3D Transferase(Phosphotransferase) domain 1 883 1093 - -
Seca6g05074 1139 Gene3D - 13 254 - -
Seca6g05074 1139 SMART serkin_6 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 SMART serkin_6 806 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Seca6g05074 1139 CDD STKc_IRAK 324 588 - -
Seca6g05074 1139 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Seca6g05074 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Seca6g05074 1139 SUPERFAMILY Protein kinase-like (PK-like) 790 1110 IPR011009 -
Seca6g05074 1139 ProSiteProfiles Protein kinase domain profile. 806 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g05074 1139 SUPERFAMILY Protein kinase-like (PK-like) 302 610 IPR011009 -
Seca6g05074 1139 FunFam L-type lectin-domain containing receptor kinase IX.1 791 882 - -
Seca6g05074 1139 CDD STKc_IRAK 812 1075 - -
Seca6g05074 1139 ProSitePatterns Legume lectins alpha-chain signature. 210 219 IPR000985 -
Seca6g05074 1139 MobiDBLite consensus disorder prediction 1120 1139 - -
Seca6g05074 1139 Gene3D - 609 749 - -
Seca6g05074 1139 Pfam Legume lectin domain 16 249 IPR001220 GO:0030246
Seca6g05074 1139 Pfam Legume lectin domain 624 724 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05074 Seca-Chr6 118024609 118029482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05074 70 606 Receptor kinase-like Gene Family AT5G10530 49.376 2.59e-170 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca6g05074 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05074 - - aprc:113852043 941.414