Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05032 ATGCTTGAGGTTTGTTTTTCTCTCAAGAGGACGCTTCAGTGCAAATCACATCCAAAACAAGTTCATGATCCAAAGACAAGTAGGCACAAAAAAAGTAATCAGAGAACAAAAGGCATTGACATCTCTAATCCCATAAGCCATGAAATTGTTCTTGATAGCTCAAACAATGAAAGTTGTCGATGTCCTCAAAGCAGTAGTAGCAGTAAAGATTCAGAAGGTTCTCACAGAACAAGAAGGCCAGCTACACCTTCAAGGACAACCAATCCTATTGATTATAATGAAGCAAATGTTTCCTCTGACACAAGGATGTGGATTGAAATGGATTCTGATGGTCCTTCAACATTAATATGTCGTAAATGTGGTGAGAAACTGAAGAATCTTGATGCTGTTGAAGCACACCATATCTCTGAGCATTCAGTCACTGAACTTCAAGAAGATTCATCTAGGCAGATTATAGAAACAATATGTGGAACAAGCTTGGTTAATTCTGAAAACATGTTGGGGCAGATTGATTGTATCTTAAAAGTTCAGAACATGTCAAAAACCCTTTCTTGCTTTGAGGAATACAGAAAAATGGTGAAGATTAAGGCTGACAAACTACAGAAGAAGCACCCGCGTTGCTTGGTTGATGGAAATGAGCTTTTAAGGTTCCATGGCACAGGTATTGCATGCTCTCTTGGCATAAATAGTTCCTATAGTCTATGCACTTTAGACTACTGTGGTGTGTGTCAAATTCTGAGGCATGGCTTCTCCACCAACAAGGAATTTCAAGGTACATTAGGTGTTTACACCACTTCTACAAGTGGAAAAGCCTTTGATTCCATTAGGCCATCTGATTCTGATGAGAGAACATTTGCTAGAAAGTCAGTTATAGTGTGCAGAGTAATAGCTGGGAGAGTTTATTGTCCTCTTGAAGAGAATCAAGAAAAGGTTGATTCAGGGTTTGACTCATTGGCAGAGAAAACAAGTAACCATTCAGATGTTGAGGAACTCTACGTATTAAATCCCAAAGCTCTGCTCCCTTGCTTTGTGGTAATCTACAAACAACAAACAGAGAAAATTAAAAGGTTCAACTCAAGCTTAAGGATAAGTAACTTTTAA 1101 0.3851 MLEVCFSLKRTLQCKSHPKQVHDPKTSRHKKSNQRTKGIDISNPISHEIVLDSSNNESCRCPQSSSSSKDSEGSHRTRRPATPSRTTNPIDYNEANVSSDTRMWIEMDSDGPSTLICRKCGEKLKNLDAVEAHHISEHSVTELQEDSSRQIIETICGTSLVNSENMLGQIDCILKVQNMSKTLSCFEEYRKMVKIKADKLQKKHPRCLVDGNELLRFHGTGIACSLGINSSYSLCTLDYCGVCQILRHGFSTNKEFQGTLGVYTTSTSGKAFDSIRPSDSDERTFARKSVIVCRVIAGRVYCPLEENQEKVDSGFDSLAEKTSNHSDVEELYVLNPKALLPCFVVIYKQQTEKIKRFNSSLRISNF. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05032 366 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 347 - -
Seca6g05032 366 MobiDBLite consensus disorder prediction 15 95 - -
Seca6g05032 366 SUPERFAMILY ADP-ribosylation 170 353 - -
Seca6g05032 366 MobiDBLite consensus disorder prediction 80 95 - -
Seca6g05032 366 ProSitePatterns Zinc finger C2H2 type domain signature. 117 138 IPR013087 -
Seca6g05032 366 Gene3D - 136 352 - -
Seca6g05032 366 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05032 Seca-Chr6 117589582 117591932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05032 99 348 C2H2 Transcription Factor Family AT5G54630 57.576 4.53e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05032 - - gmx:100792577 486.108