Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05018 ATGGCAGAGGAGTTTCAAGCTGGTATTTGTGGTGAAACTTGGTGGAATATTAATCCAACAAGAAGTGTATTCCCTCTTATGAGCTCATCATCAACCTGTTCTGTGGCAGCTAATGATGCAGCCAACTATAGCACTTGGCAAACTGACTTTGTAGATTTGAAGGCAACAAGGTCTTGTGCTGAAGAGATTAATAATATCAATATGGTTTCTGATGGTTCTCTGGGTTTTGTTGATGCTCAGAAGGCACAGCAGAGTGAATCAGTTAGTGATGGAACTGGTGGTAGCATCTTGATGGATTCCACCTTACAAATTATGGGTTTTGGCCTGTCCTCCTCTTCAAATTCATCCAATTGGAATCAGTCTCTATTTCCACCACGCACGGCCGCGCAGCCTTCCAGCCCGTCAGCCACCTCCGTTCGTCCTCCTCTCCCCTGCGAGCGACGCACGACTGCCTCCCTTTCTCTCCTCTCCTTCCTCAAGCGGCATCTCTGCTGCGCAAAACCACCCTCACGGCCGCACAAAACCTCCCTTGCACCCGCACGCCGCCGTTCGTCAACCTCAGGCCGCTGTGTGCGGCCGCGTCCCACCTGCGCCGCGATCTGCCATTGCAGAGTCGCGGAGCTCCCCCAGCGGCGCACACACTCACCTCTCCCTTCATTTGCTCTCTGA 669 0.5247 MAEEFQAGICGETWWNINPTRSVFPLMSSSSTCSVAANDAANYSTWQTDFVDLKATRSCAEEINNINMVSDGSLGFVDAQKAQQSESVSDGTGGSILMDSTLQIMGFGLSSSSNSSNWNQSLFPPRTAAQPSSPSATSVRPPLPCERRTTASLSLLSFLKRHLCCAKPPSRPHKTSLAPARRRSSTSGRCVRPRPTCAAICHCRVAELPQRRTHSPLPSFAL. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05018 222 MobiDBLite consensus disorder prediction 118 144 - -
Seca6g05018 222 MobiDBLite consensus disorder prediction 118 136 - -
Seca6g05018 222 MobiDBLite consensus disorder prediction 169 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05018 Seca-Chr6 117476159 117477121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05018 1 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 35.938 1.55e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05018 - - gmx:100794682 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05007 12 136313810 136323487 Seca6g05018 6 117476159 117477121 PCT