Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04991 ATGGATTTTGATCTTGAAGACCCACTAGCCAGCTTCAAGGAACAGCAAACCTGTACTATATCTGAACTCTTTGCCTCGGAATCTGATCACATGCCCTCACCAAACTCCTTAAGTTCAACACATTTTCATGTTTCCTTCCGTTGTGAAACCATTTCTCTCATACTTCAGGTCCAGCTTTCTTGCAATTTGGACCCTTTTGTAGCTTATCTTGCCATAAATTACTTGCACCGTTTCATGTCAAGGCAAGAAATTCCGGCCATTAGTCCTGTGAGTTTGCAGCAGGGGAAGCCGTGGTTACTCAGGCTCGTTGGTATATCCTGTCTTTCTCTCGCTTCAAAGATGAAGAACACAACTTTACCACTTACCATTATGCAGAAAGAAGGTTGCAACTTTGATGCTCAAAGTATTGAGAGAATGGAACTCGTTATTCTGGGGGCTCTGAATTGGCGTATGAGGTCAATTACACCTTTTCCCTTCTTGCATTTCTTCATCTCTTTAGCTGAAGTCAAAGACCAATCACTGAAACAAGCACTTAAAGATCGAGCTTCAGAGATGATATTCAATGCTCATAATGATATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCAACTGCTCTTATATGTGCATCTCATGAACTGCTCCCGCAACAATATTCTAATATTAGAGCTTCAATCACAGCTTGTGAGTATGTAGACGAGGAGACATTGTCCAAGTGCTTTGATTTGATGAAAGAGATGGTGAGAATGGAAGGAAAGGAGTTAGTGATAGATTCAAATACAAGCTTCTTAAGCACTGAAACTCCAGTGAGTGTGCTGGAGAGAAGCACCAAGCGTCAGAGAATTTGA 852 0.4096 MDFDLEDPLASFKEQQTCTISELFASESDHMPSPNSLSSTHFHVSFRCETISLILQVQLSCNLDPFVAYLAINYLHRFMSRQEIPAISPVSLQQGKPWLLRLVGISCLSLASKMKNTTLPLTIMQKEGCNFDAQSIERMELVILGALNWRMRSITPFPFLHFFISLAEVKDQSLKQALKDRASEMIFNAHNDIKLLEYKPSTIAATALICASHELLPQQYSNIRASITACEYVDEETLSKCFDLMKEMVRMEGKELVIDSNTSFLSTETPVSVLERSTKRQRI. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04991 283 Gene3D - 33 152 - -
Seca6g04991 283 FunFam D6-type cyclin 32 149 - -
Seca6g04991 283 Gene3D - 22 243 - -
Seca6g04991 283 SMART cyclin_7 52 145 IPR013763 -
Seca6g04991 283 Pfam Cyclin, N-terminal domain 22 151 IPR006671 -
Seca6g04991 283 PANTHER CYCLINS 45 250 IPR039361 -
Seca6g04991 283 SMART Cyclin_C_2 154 283 IPR004367 -
Seca6g04991 283 FunFam D6-type cyclin 150 243 - -
Seca6g04991 283 SUPERFAMILY Cyclin-like 20 151 IPR036915 -
Seca6g04991 283 CDD CYCLIN_AtCycD-like_rpt2 154 245 - -
Seca6g04991 283 Pfam Cyclin, C-terminal domain 154 250 IPR004367 -
Seca6g04991 283 SUPERFAMILY Cyclin-like 136 250 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04991 Seca-Chr6 117270038 117272385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04991 1 276 Core Cell Cycle Gene Families AT4G03270 41.034 3.21e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04991 K18812 - gmx:100799985 428.713