Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04989 ATGGAGAACGCAACGATGATAGGACCGGCGAACATGACAGACAAATCAATAATTTGCTACACACCAACCATGACAACAACAAATGGTATATGGCAGGGAGATAACCCTTTAGATTTCACCCTCCCTCTCTTCATCGTCCAATTAACCTTAGTCGTTACTGCCACACGTTTCTTTGTTTTCATCCTCAAGCCCTTTCACCAACCCCGTGTCATTGCTGAAATCATGGGTGGATTGCTGTTGGGCCCATCAGTGTTTGGTAAGAATCAAAGATTTGCCAACAATGTATTCCCTCTAAAGAGTGCCATGGTGATTGAAACAATGGCAAACATAGGCCTCATATACTTCCTCTTCCTAGTTGGGTTAGAGATGGACATAGCGATTGTCACACGCACTGGGAAGAAGGCAGTGACCATAGCCATTGCTGGTATGATATTGCCCTTTATTGTTGGTGTTGGCTCCTCCTTTTTCTTAGATGTCAAAGACAGAGACAAAAATATAAACGAAAGCAGCTATGTCGTTTATCTTGGCATTGTTTTATCTGTCACTGCATTCCCAGTGCTTGCTCGCATGCTTGCTGAGCTTAAGCTCATCAACACAGAGCTTGGCAAGCTTGCACTCTCAACTTCCCTCATCAATGATGTTTGTGCCTGGCTGTTGCTCGCTCTAGCTATTGCTTTATCAGAGCAAACTTCTAACACCTTCGCCTCTGTATGGGTTGTGATATCAAATCTTGTTTTTGTTACTTTCTGCTTTCTTGTTGTTAGGCCAGCAGTCTCCTGGTTGATCAAGAGAACCCCAGAAGGAAAACCCTTCAGTGAGTTCCAAATATGCATTGTACTCACTGGTGTTATGATCTCAGCCTTCATCACAGATGTCCTCGGAACACATTCTGTTTTTGGAGCTTTTGTATATGGCCTAGTGATTCCAAATGGCCCACTTGGAGCTACTATAATAGAAAAGCTAGAAGACTTTGTTTCCGGGCTTTTACTCCCTCTCTTTTATGCTATTAGTGGGCTTAAGACTGATATCAACTTAATCACTAAAGGTGGTTCATGGACATTTGTATTCTTGGTGATTCCTCTTTCTTGTTTTGGCAAGATCGTCGGGACTCTTATTATTTCACTCCTTTTCCAGATACCAACCCGTGATGGTATTGTTCTTGGTTTACTTATGAACACTAAAGGCCTTATTGAAATGATTGTGCTCAATATTGGGAGGGAGCAAAAGGTACGCAACTCACTCTCAGTATATCCTTTTAATTTGGTCAGCTCACATTGGCATATGCAGGTCTTGGATGATGAAGTGTTCTCAATTATGGTTATTGTAACCCTCATAATGACAGCATTCATTTCACCCGTTGTAACATTAATTTATAAGCCAAGGAAAAGGCTCATACCTTACAAAAAGAGAACAGTGCAAAGTTCAAGACTTGATGCAGAGTTACGGGTGCTTGTGTGCATACATTCCCCCAGAAATGTGCCTACAATAATCAATCTCCTTGAAGCAACCCACCCAAGCAAAAGGTCTCCCGTATGTGCTTATGTGCTCCACTTAGTTGAGCTCACTGGTAGAGCTTCTGCCATGCTCATTGTCCATGCTAATCGACTATCAGGTGGCCCAGCCCTCAATAAAACACAAGCACAAACTGACCATATTATCACTGCATTTCAGAACTTTGAGGAACATGTTGGTTATGTCTCAGTCCAACCCTTAACAGCTATTTCCCCTTACTCTTCCATGCATGAAGACATATGCACTTTGGCAGAGGAGAAAAGGGTATCCATCATCATCATCCCTTTCCATAAGCAACAGACAGTTGATGGAGAAATGCAAGACACAAATCCAGCATTCAGAATGGTGAACCACAATTTATTACAGAGTTCTCCTTGCTCACTTGGGATACTTGTCGATAGAGGCCTTAATGGATCCAACCGCTTAATTGCAAATCAAGCATCTCATCAGGTGGCTGTGTTATTTTTTGGAGGACCAGATGATAGGGAGGCACTATCATATGGATGGAGAATGTCAAGGAATCCAAGGGTTCACCTCACTGTCATGCATTTCATTCCAGGCTATGAGAAGACTGAGGCTGAGCTAGATGATCAAAGAACAACAATCACAAATGATGGGTGGGAAAATGAACTGGATGAGGAGTATATACATGAGTTCAAGATGATAGCTGCAACTGATGAGTCAATTGTTTATATAGAGAACGTTGTAAGTAATGGGGAGGAAACAGTAGCTGCAATAAGATCAATGAACAATGTGAATGACCTCTTCATAGTTGGGAGAGGTCAAGGGACAACGTCACCACTAACAGATGGCCTAACAGATTGGAGTGAATGCCCGGAGTTGGGAGCCATTGGGGATTTGCTAGCTTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGATGCATCAATATGTTGCACAAGGGCCAGATGGGGAGGATATTTTTGTATCTGAAAGACCATGGCAAACAAGTGAAAACTATCATGGCATGAAACAACATATGGGAAGATATACAACAGTGCCAAGGGGGTCAGTTCTTTTATAA 2559 0.4236 MENATMIGPANMTDKSIICYTPTMTTTNGIWQGDNPLDFTLPLFIVQLTLVVTATRFFVFILKPFHQPRVIAEIMGGLLLGPSVFGKNQRFANNVFPLKSAMVIETMANIGLIYFLFLVGLEMDIAIVTRTGKKAVTIAIAGMILPFIVGVGSSFFLDVKDRDKNINESSYVVYLGIVLSVTAFPVLARMLAELKLINTELGKLALSTSLINDVCAWLLLALAIALSEQTSNTFASVWVVISNLVFVTFCFLVVRPAVSWLIKRTPEGKPFSEFQICIVLTGVMISAFITDVLGTHSVFGAFVYGLVIPNGPLGATIIEKLEDFVSGLLLPLFYAISGLKTDINLITKGGSWTFVFLVIPLSCFGKIVGTLIISLLFQIPTRDGIVLGLLMNTKGLIEMIVLNIGREQKVRNSLSVYPFNLVSSHWHMQVLDDEVFSIMVIVTLIMTAFISPVVTLIYKPRKRLIPYKKRTVQSSRLDAELRVLVCIHSPRNVPTIINLLEATHPSKRSPVCAYVLHLVELTGRASAMLIVHANRLSGGPALNKTQAQTDHIITAFQNFEEHVGYVSVQPLTAISPYSSMHEDICTLAEEKRVSIIIIPFHKQQTVDGEMQDTNPAFRMVNHNLLQSSPCSLGILVDRGLNGSNRLIANQASHQVAVLFFGGPDDREALSYGWRMSRNPRVHLTVMHFIPGYEKTEAELDDQRTTITNDGWENELDEEYIHEFKMIAATDESIVYIENVVSNGEETVAAIRSMNNVNDLFIVGRGQGTTSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVMHQYVAQGPDGEDIFVSERPWQTSENYHGMKQHMGRYTTVPRGSVLL. 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04989 852 PANTHER CATION/H + ANTIPORTER 16 810 - -
Seca6g04989 852 Pfam Sodium/hydrogen exchanger family 51 453 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g04989 852 Gene3D - 43 464 IPR038770 -
Seca6g04989 852 FunFam Cation/H(+) antiporter 15 43 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04989 Seca-Chr6 117258607 117261558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04989 13 830 Antiporter Super Family AT2G13620 63.164 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04989 K26731 - gmx:100800514 1304.27