Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04971 ATGCAAACGAGGTATATGGAGAGATCGAGCAGTATGGCGAGGGAGAAGCGAAGCTTAGATTCAAGTACAAGTGAGGAAGACCAGCCTGAAAGGAAGCGACCTGCCTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAGCTTTGCTCATCATTGGAGCCTATTCTACGAAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGCCCTGCCAAGCTTAGTGGGAGGTCTTCTCCCAAGCGCATAGAAGGCCCTGATGGCAACAATTTACAATTACAATTCAAGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCAGGGCACTGCCATACATATTGTTTTAATTGATGCAAACACCGGCCATGTTGTCACATCTGGCCCAGCATCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAGTTGGAGTGAAGGAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAAAGACCTCTCCTCACTGGTGATCTGCAAGTGACACTAAAGGAGGGTGTTGGAACACTGGGTGATCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTGGGGCTCAAAGTTTCCTCAGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTACCCACCAGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGGCTAACTAAAGCAGGAATATATACTGTTGAAGATGTCCTACGACTTGTGGTGAGAGACCCACAGAGACTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGCGGAAAACTCTATGTATACTACCCTGATGATGCAAGGAATATTGGTGTTGTGTTCAATAACATTTATGAGTTGAGTGGCTTAATCACCAATGAACAATATTACTCTGCTGATTCTCTCTCTGACAGTCAAAGGGTTTATGTGGACACTTTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAAGACTTTGACCACCTCCCAACCTCAGGCTCCAGTGGGTTCCCATAATTATTCAAACTCACTTGATCAGCAGATCTCCATCCCAATTCTACCAGTTCCTGTACACACAGGGCAAGCTTCAATGGATCCTGGAGTATCAGTTGGAGGTTATCACGATGGTACGAATACCAGATTCTCAATGCAACCACAGAATGCTAATCTTAATTCTTCTATTCAGTTTGATAATACTGCATTCCCACTACAAAACCAACTGATAAGTGCTTCACACCAATCTCAACTTCCAAGAAATGAGAATGAGCTGACTCTTGATCCACCACAACCAGCCACTCCTGGTTTTCAGACTGTCAGCTATTCAAATCCTACTTATAGAGGATTTGAAGATTTCTTCCCAGAAGAAGAGATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGAATTTTTAATATGGGAGGGCAATCTCATGCTCCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTGCTTACATGCCTGCAACTTCCACGAACTACAACTTAGATGATGAGCGAAGCCGTTCCTCAGGTAAGGCTGTTGTTGGGTGGCTCAAGCTTAAGGCAGCTCTGAGATGGGGCATTTTTATTCGGAAGAAGGCTGCTGAGAGACGGGCACAACTTGTTGAGCTGGATGACTCATAG 1899 0.4413 MQTRYMERSSSMAREKRSLDSSTSEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLSGRSSPKRIEGPDGNNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPASCVKLDVIVLEGDFNNEDDDSWSEGEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLTKAGIYTVEDVLRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNIGVVFNNIYELSGLITNEQYYSADSLSDSQRVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLTTSQPQAPVGSHNYSNSLDQQISIPILPVPVHTGQASMDPGVSVGGYHDGTNTRFSMQPQNANLNSSIQFDNTAFPLQNQLISASHQSQLPRNENELTLDPPQPATPGFQTVSYSNPTYRGFEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHAPFNAPEDGYPYSSAYMPATSTNYNLDDERSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS. 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04971 632 PANTHER OS02G0177800 PROTEIN 13 547 IPR012416 GO:0005516
Seca6g04971 632 MobiDBLite consensus disorder prediction 1 34 - -
Seca6g04971 632 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Seca6g04971 632 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Seca6g04971 632 MobiDBLite consensus disorder prediction 9 33 - -
Seca6g04971 632 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04971 Seca-Chr6 117093595 117100878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04971 9 627 Calmodulin-binding Proteins AT5G57580 63.060 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04971 - - gmx:100802994 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g04943 12 134709779 134714265 Seca6g04971 6 117093595 117100878 PCT