Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04845 ATGAGACGGTGCAATGACTCTGATGAGGAGGAGAGGGGCAATGAATCAATGACGCCTACTATTAGTATTGCACCTACAAGAGCTGACATAAAACTCACAGAAGAAGTTCGAACCATAGAATGCCCCTCATGCGGCCATAATATTCAAGTCAAAGATCAGGGTGGAATTCATGACTTGCCGGGATTGCCAGCTGGAGTGAAGTTTGATCCGAATGATCAAGAAGTACTTGAGCATTTGGAGGCAAAAGTGATGTCTGATGTGCGCAACCTTCATCCCCTCATTGATCAGTTCATACCAACGCTTGAAGGGGAGAACGGAATCTGTTATACTCACCCACAAAAGCTACCAGGAAGTGTGGTGAAGGGGAGAACATGGACAAAGGAACGACTGAAGGAGCACCTATGCTTAAGAACTGAACAATTCTATAGTCTATACAGACACAAAATCATCAGCCAACAACATAACAACCTTCTTGTATTTTATATCAGTGTCACAATTCAGGAGTTAGCAAAGATGGACAAATCCGGCACTTTTTTCATAGGCCTTCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACAGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGGAAAACTAGAGCAGTATATGCTGGTGGAGCTGTGA 666 0.4324 MRRCNDSDEEERGNESMTPTISIAPTRADIKLTEEVRTIECPSCGHNIQVKDQGGIHDLPGLPAGVKFDPNDQEVLEHLEAKVMSDVRNLHPLIDQFIPTLEGENGICYTHPQKLPGSVVKGRTWTKERLKEHLCLRTEQFYSLYRHKIISQQHNNLLVFYISVTIQELAKMDKSGTFFIGLQKHTQLEQGKEERFTQMKKEVKQDGTKRGKLEQYMLVEL. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04845 221 Pfam No apical meristem (NAM) protein 63 123 IPR003441 GO:0003677|GO:0006355
Seca6g04845 221 SUPERFAMILY NAC domain 57 120 IPR036093 GO:0003677|GO:0006355
Seca6g04845 221 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 32 125 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04845 Seca-Chr6 115867279 115874143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04845 41 117 NAC Transcription Factor Family AT4G28500 76.623 4.38e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04845 - - gmx:100809389 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04845 6 115867279 115874143 Seca6g04845 6 115867279 115874143 ECH