Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04835 ATGAAGAAGATTTCCAAGAGCAGCTGCAAGTCAGCATCACACAGGCTCTTTAAGGACAAGGCAAAGAACCATGTTGATGATCTTCAGGTTATGTTCCTGGATCTCCAGTTTGCCAGGAAGGAGAGCCGTACTGTTGATGCTGCACTTCTTGAGGAGCAAGTCCATCAGATGCTTCGGGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGGAGGCAGTCTTGGATCATTTTCAACCGATATCTGTAGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGCTGTGCCTAAGCCTGAACCTAATGATCAGACTCTGCAGGCCGGGGCTAAGGTGATATTCCAAGAGGGTTTAAATGTAAATCAGGGCCAGCATCAACATGATTTCCTATTAATTAATGAGTGCAAATACTCAACCTTAGGAGTTCCCAATCTGGCAGCTAACAACTTGGATGGGCGGCCTGCTTTAGAATTAGAGTATCATCAATTTGATTCAAATGAGGACTTCAATCACAGCTTCTATGCTGGTTATAATGGTACAGATTTTTGTGAGGAGGATGCTGTTCCTCATATATCTGGCTATCTACCAAGTCTCTGTCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTTCAAGGCCTGTGCAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTAAATGAAGGACCACCAGGCATGGCCCCAGTTCTACGGCCTGGGGGAATTGGACTGAAGGATAATTTACTTTTTGCTGCGCTTAGTGCAAAGGCAGAAGGAAAAGAAGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGAGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGATCATTGCCAGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGACCCACAGCCACTAAATCATTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGGAAAGATAACTAGTGATTCAGTTGCTGATCTGCAGAAGCGAATGGGAAGGCTCTCTGCTGAGTTTCCCTATGATAACAAACGGTCTGCCAAAGGCAGAGCCAAACTTAATGCCAAGGTTGCCAGCATAGATGGTGTCTATTCAGCTTCAAACAGAGTGACTCCACTAAATGGAACATATGAATATGGGTTAGCTGCACCATATGATTATCTTGTTGAAAACCCAAGCAACTATTATGTGACATGA 1464 0.4474 MKKISKSSCKSASHRLFKDKAKNHVDDLQVMFLDLQFARKESRTVDAALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAVPKPEPNDQTLQAGAKVIFQEGLNVNQGQHQHDFLLINECKYSTLGVPNLAANNLDGRPALELEYHQFDSNEDFNHSFYAGYNGTDFCEEDAVPHISGYLPSLCPPPSAFLGPKCALWDCSRPVQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAEGKEVGIPECEGAATAKSPWNAPELFDLSVLESETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKGKITSDSVADLQKRMGRLSAEFPYDNKRSAKGRAKLNAKVASIDGVYSASNRVTPLNGTYEYGLAAPYDYLVENPSNYYVT. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04835 487 PANTHER TRANSCRIPTION FACTOR VOZ1 1 480 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04835 Seca-Chr6 115781594 115784955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04835 3 486 VOZ-9 Transcription Factor Family AT1G28520 69.697 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Seca6g04835 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04835 - - gmx:100806521 845.884