Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04820 ATGGGGACCTCTGTTACACATTTGTTGCTTTCCCTCACTCTGATGATTTTCATTGTTTGCTTGTTGTGTGTGATGGCCAAAGTTGAAGCTTTAAACAAAAATAATATCTCTGGCTTTTATGTGTTTGGAGACTCCACGGTAGATGCAGGGAACAACAACTATATAAAGACGCTTTTCAGGAGCAATTTTCCACCATATGGCATTGATTTTTCCAATCATGTTCCTACAGGGAGGTTTACCAATGGGAAGCTTGCCACAGATTACATTGTTTCATATGTAGGTTTGAAAAAAGAGCTTCTTCCACCTTATTTGGACCCAAATATGAGGAATGATATTGAAGAGTTGCTGACAGGAGTTAGTTTTGCTTCTGCTGGTTCTGGGTTTGACCCACTTACACCAAGCATCTCTAATGTAATTCCAATTCCAAAGCAATTGGAATATTTTAGAAAATGTAAAAAGAGGCTGGAAGATGCGCTGGATAAGCAAAGAATAGAAAATCATATGAAGAAGGCAGTGTTTTTCATCAGTGCTGGTACCAATGACTTTGTTCTTAATTATTTTACTTTACCAATGCGAAGAAAGAGCTTCACTCCCTTAGCCTACCAGCACTTCTTGATTCAGCAAATCAAACAATTTATACAGGATTTGTTGGCAGAAGGCGCTGAAAAAATTGCAATAGTTGGAGTACCTCCAATTGGATGCCTACCGTTGATGATCACCTTGAATTCCCCTAATGCGTTTTTGCAGCGTGATTGTATCGACCAATATTCCTCCGTTGCTCGAGATTTCAATCTACTCCTTCAAACTGAATTATACACAATGCAATTGCAGCTCAATAATGTATCTTATCCAAATGCCAAGATCTATTACGTTGACATATATGGACCATTGGCCGATATGATTCAATCGCATCAAAGATTTGGATTTGATGAGGTACACAATGGCTGTTGTGGAAGTGGGTACATTGAAGCAACAATTTTGTGTAATAAGATTTCATATGTCTGCCCTGACCCATCCAAGTATATATTCTGGGATTCAATTCACCCAACAGAGAAGGTATACCACAACCTCTTCTTGGCTAGCTTGCCCACCATTGATTTTATCATCAACAACTAG 1116 0.388 MGTSVTHLLLSLTLMIFIVCLLCVMAKVEALNKNNISGFYVFGDSTVDAGNNNYIKTLFRSNFPPYGIDFSNHVPTGRFTNGKLATDYIVSYVGLKKELLPPYLDPNMRNDIEELLTGVSFASAGSGFDPLTPSISNVIPIPKQLEYFRKCKKRLEDALDKQRIENHMKKAVFFISAGTNDFVLNYFTLPMRRKSFTPLAYQHFLIQQIKQFIQDLLAEGAEKIAIVGVPPIGCLPLMITLNSPNAFLQRDCIDQYSSVARDFNLLLQTELYTMQLQLNNVSYPNAKIYYVDIYGPLADMIQSHQRFGFDEVHNGCCGSGYIEATILCNKISYVCPDPSKYIFWDSIHPTEKVYHNLFLASLPTIDFIINN. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04820 371 Gene3D SGNH hydrolase 26 365 IPR036514 -
Seca6g04820 371 Pfam GDSL-like Lipase/Acylhydrolase 40 358 IPR001087 GO:0016788
Seca6g04820 371 SUPERFAMILY SGNH hydrolase 165 358 - -
Seca6g04820 371 PANTHER GDSL ESTERASE/LIPASE EXL3 19 357 - -
Seca6g04820 371 CDD SGNH_plant_lipase_like 39 355 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04820 Seca-Chr6 115668602 115675025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04820 41 357 Pollen Coat Proteome AT1G75910 34.969 2.10e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04820 - - gmx:100788326 594.734