Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04819 ATGATGTTAACAATGAAAGTGATACTACTGGCAGTGGCACTGACACTGACCATAATGCCATGGTATTCAGTAGTTGCTGCGGACAACATTCATCAACTGAGGCAATTGGCAGCTAAGAATAATATGAGTTGCATCCTGGTATTTGGAGATTCAAGTGTTGATCCTGGCAACAACAATGTTCTTCGAACCACCGTGAAAGGCAACTTTCCTCCTTACGGGAAGGACTTCTTTAACAGCTGCCCAACAGGAAGGTTTACTAATGGCAGACTTGCTACAGACTTCATTGCTGAAGCATTAGGATACAGAAAAGTAATTCCGGCATTTCTTGACCCAAAATTGAAGGCAGAAGATCTGCCATATGGTGTTAGTTTTGCATCAGCAGCTACAGGTTATGATGATTATACTGCTAATGTTTCGGTACATACATTCTATCACCCTACCCTGCTTTTGAATTCAATGTATTTGATGAAACAGAGTGTTCTGTCTGTTTCGAAACAGCTCGAGTATTTTAAGCATTATAAGATCCACTTGAGAAAATTGGTGGGTGAAGAAAAGGCAGAATTCATTATAAGAAATGCATTGTATATTGTTAGCATGGGTTCAAATGATTTCCTCCGAAACTATTTCCTGGAACCAACTCGCCCCAAGCAATTCAGCTTGCCAAAATTTCAGGATTTCTTGCTCTCCCTCATGACTAAGGACATTCAGGTGATGTATAGGCTAGGAGCCAGGAGGTTGGTGGTTGTAGGAGTCCTTCCCATGGGATGTATTCCATTTATGAGGACCATTAAGAACCAACAAAGCTGCGTTAGAAGCCTAAACAGTGTAGCTTATTCATTCAATGCAAAATTATTACAGCAACTGGCCCACTTGAAGGCAAAACTGGGCTTACACATTGTTTATGTTGATATTTATGGTATGATTCAAAGTGCCATAATGGACCCTAAAAAATACGGTTTTCATGAAGTCTCAAAGGGATGTTGCGGGACAGGGACAATAGAATATGGAGATTCATGCAAAGGGATGAGTACTTGTTCAGATCCCAACAAATATTTATTCTGGGATGCTGTTCATCCAACACAGAAGATGTATAAGATTGTTGCTGATAAGGCCATCCAATCTATTACTAAAGAACTCTTTTCACACCATAGCTGCCATTTAAATGCATGA 1170 0.4009 MMLTMKVILLAVALTLTIMPWYSVVAADNIHQLRQLAAKNNMSCILVFGDSSVDPGNNNVLRTTVKGNFPPYGKDFFNSCPTGRFTNGRLATDFIAEALGYRKVIPAFLDPKLKAEDLPYGVSFASAATGYDDYTANVSVHTFYHPTLLLNSMYLMKQSVLSVSKQLEYFKHYKIHLRKLVGEEKAEFIIRNALYIVSMGSNDFLRNYFLEPTRPKQFSLPKFQDFLLSLMTKDIQVMYRLGARRLVVVGVLPMGCIPFMRTIKNQQSCVRSLNSVAYSFNAKLLQQLAHLKAKLGLHIVYVDIYGMIQSAIMDPKKYGFHEVSKGCCGTGTIEYGDSCKGMSTCSDPNKYLFWDAVHPTQKMYKIVADKAIQSITKELFSHHSCHLNA. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04819 389 CDD SGNH_plant_lipase_like 44 375 IPR035669 -
Seca6g04819 389 Gene3D SGNH hydrolase 29 379 IPR036514 -
Seca6g04819 389 PANTHER GDSL ESTERASE/LIPASE EXL3 18 370 - -
Seca6g04819 389 SUPERFAMILY SGNH hydrolase 194 375 - -
Seca6g04819 389 FunFam GDSL esterase/lipase APG 34 376 - -
Seca6g04819 389 Pfam GDSL-like Lipase/Acylhydrolase 45 370 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04819 Seca-Chr6 115663723 115667864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04819 24 379 Pollen Coat Proteome AT1G75930 34.426 4.97e-58 191