Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04813 ATGGGTTCAGGCGATTGGTTTAAGTCAATAATTAGCTTAAGAAAATCAAAATCGGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAGGAGAATCTAAGTGCATTGAAGTCAAACAATTATACAGGAAAAGAGTCTAGTGGTTTAGCAAATGGTATTAAAAATGAAAATCTTGGGTCAGATGGGGTGTCAGTTGAAGTTATTGCAGCAACAAAGATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGTCGCTTGAAAGGGTTCACAAAACTGAAGGTCCTAACAGAAGGTTACTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAGGCAGAGATTAGAACTCGCCGAATCTTTATGGTGACAGAAGACAGGATTAAGCGGAAGAAACTAGAGTCTCAACTAAAACTTGAGGCAAAGCTCCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAACCCTTGGAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAAATGCTTGGTAATTATGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCATGGCATTAGCCCAAAGAAAGCTCAAAATAAGCAGTCAAGCAAGTCTCAGAAAGATAAGAGTGCATCAACAACACCTAAAACCCCTGCTTCAGCCAATGCAAAAGGGACTCCTCCTTTGGGTAATGGAAAAGGGACTACAAAAGCTAGGAGATTGTCTTATCCACCCACAGAAAAAACTGTGGTTCAAGAAGGAGTGCAGTGA 906 0.4349 MGSGDWFKSIISLRKSKSGRSKKAKGILAQENLSALKSNNYTGKESSGLANGIKNENLGSDGVSVEVIAATKIQTAFRAYKARKALRRLKGFTKLKVLTEGYSVKKQASTAITYLHSWSKIQAEIRTRRIFMVTEDRIKRKKLESQLKLEAKLHDLEVEWSGGSETMEETLGRIHQREEAAVKRERAMAYAFSHQWRANSSQSQMLGNYELGKANWGWSWKERWIAARPWESRVHGISPKKAQNKQSSKSQKDKSASTTPKTPASANAKGTPPLGNGKGTTKARRLSYPPTEKTVVQEGVQ. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04813 301 MobiDBLite consensus disorder prediction 235 301 - -
Seca6g04813 301 ProSiteProfiles IQ motif profile. 69 94 IPR000048 GO:0005515
Seca6g04813 301 Gene3D - 22 94 - -
Seca6g04813 301 PANTHER IQ-DOMAIN 5-RELATED 1 265 - -
Seca6g04813 301 MobiDBLite consensus disorder prediction 239 266 - -
Seca6g04813 301 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04813 Seca-Chr6 115608585 115612980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04813 1 289 IQD Protein Family AT2G33990 52.595 5.02e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04813 - - gmx:100813685 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04813 6 115608585 115612980 Seca6g04813 6 115608585 115612980 ECH