Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04771 ATGGCATCCTCAAAGGAACGTGAAAATTTCGTCTATGGCGCCAAGCTCGCTGAACAAGCCGAGCGATACGAAGAAATGGTGGATGCGATGAAGAATGTGGCGAAGCTGAATGTAGAATTGACGGTTGAAGAGCGAAACCTTCTGTCAGTTGCGTACAAGAATGTGGTGGGCGCACGCAGGGCCTCGTGGAGGATCCTGTCGTCGATTGAACAGAAGGAGGAATCGAAAGGGAACGATCTGAATGCGAATCGGATAAAGGAGTATAGGAAAAAGGTGGAATCTGAGTTGGCCAATATATGCACCGATATCATGACTATGATCGATAACCATCTCATTCCACACTCGTCGGGTGAATCCAATGTCTTCTACTACAAAATGAAAGGTGACTATTACCGGTATCTGGCTGAGTTTAAGGCCGGGGATGAGAGAAAAGAGGCTGCTGATCAGTCCTTGAAAGCATATCAGGAAGCTTCCACTGCAGCAGAAGCTGAGTTACCTCCCACACATCCCGTCAGACTGGGTTTGGCTTTGAACTTCTCTGTCTTCTATTATGAAATTTTGAACTCTCCTGAAAGGGCTTGTCACCTTGCCAAGCAGGCATTTGATGTAGCAATCTCTGAGTTGGATACTCTCAATGAGGAATCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGGTGGAAATTAA 735 0.4639 MASSKERENFVYGAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVAYKNVVGARRASWRILSSIEQKEESKGNDLNANRIKEYRKKVESELANICTDIMTMIDNHLIPHSSGESNVFYYKMKGDYYRYLAEFKAGDERKEAADQSLKAYQEASTAAEAELPPTHPVRLGLALNFSVFYYEILNSPERACHLAKQAFDVAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGGN. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04771 244 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Seca6g04771 244 SMART 1433_4 7 244 IPR023410 -
Seca6g04771 244 FunFam 14-3-3 protein epsilon 2 244 - -
Seca6g04771 244 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca6g04771 244 PIRSF 14-3-3 1 243 IPR000308 -
Seca6g04771 244 ProSitePatterns 14-3-3 proteins signature 2. 216 235 IPR023409 -
Seca6g04771 244 SUPERFAMILY 14-3-3 protein 6 236 IPR036815 -
Seca6g04771 244 Coils Coil 144 164 - -
Seca6g04771 244 Gene3D - 1 241 IPR036815 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 118 140 IPR000308 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 180 206 IPR000308 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 207 236 IPR000308 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca6g04771 244 PRINTS 14-3-3 protein zeta signature 153 179 IPR000308 -
Seca6g04771 244 Pfam 14-3-3 protein 14 234 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04771 Seca-Chr6 115234797 115238932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04771 1 242 14-3-3 family AT2G42590 81.070 5.05e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04771 K06630 - gmx:100807980 426.017