Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04763 ATGCCGGACTTCCACGACTCTCTCACGCCGACGCCGCCGCCGTCACGTCCCGTCCCCGTCCGCGAGGATTGCTGGTCCGAGGAAGCCTCCTCCACCCTCGTCGACGCCTGGGGTCGCCGTTACCTCGAGCTCAATCGCGGTAATCTCCGTCAGAAGGACTGGCAGGATGTCGCCGACGCCGTCAACGCCCTCCACGGCCACACTAAGAAGACCCATCGCACCGACGTTCAGTGTAAGAATCGCATCGATACCATTAAGAAGAAGTATAAGATCGAGAAGGCTAGGGTTTCCGCTTCCAACGGTGCCGTTTCTTCCTCTTGGCCTTTCTTCGAACGATTGGACGCTCTGATTGGCCCCAATTTCAATGCCAAAAAATCTTCCTCTTCGCCCTCCCCGTCGCCCCCCGTCGCTCTCCCCTTGTTGCCCCATCGTAAAAACCTTTCTTCTGCCCCCGCGATTGCGGTGCCGCCGACGGCCGTGGCACTGCCGATGCCGCAGAAGCGGTCGGCAGCGATGGTGATGGATGATGGTTACTTTAGGAGGAATTACTCCGCGATGGCGGCCGCCGCGGCTGCTGCGGAGGCTGATGAGGATGAGGACGATGAAGAGGAGGAAGAGGAAGCGGAGGAGGAGGAAGATGAAGATGAAGGGAGGGGAAGTGAAGTGGAGGAAGGGGAGAGGGAGAGGGAAGGGTTGAGGAGGTTGGCCAAGGCGATAGAGAGATTTGGTGAAGTGTATGAAAGAGTGGAAGGACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAGCGGATGCAGTTTGCCAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAAGTTCAGCTGGAGAGAATTAAGCGCGGGAAACGATCTGGGTCTAACGGTGAGTTAAAAAATTTTCAGCTTTTTAATTATTCCTTCTGGCTTGATTTGGTAACATGCTGTACTTTTTAG 966 0.5507 MPDFHDSLTPTPPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGAVSSSWPFFERLDALIGPNFNAKKSSSSPSPSPPVALPLLPHRKNLSSAPAIAVPPTAVALPMPQKRSAAMVMDDGYFRRNYSAMAAAAAAAEADEDEDDEEEEEEAEEEEDEDEGRGSEVEEGEREREGLRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGELKNFQLFNYSFWLDLVTCCTF. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04763 321 MobiDBLite consensus disorder prediction 193 221 - -
Seca6g04763 321 Gene3D - 25 91 - -
Seca6g04763 321 FunFam trihelix transcription factor ASIL2 25 91 - -
Seca6g04763 321 Coils Coil 188 214 - -
Seca6g04763 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 293 IPR044823 -
Seca6g04763 321 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Seca6g04763 321 MobiDBLite consensus disorder prediction 123 142 - -
Seca6g04763 321 MobiDBLite consensus disorder prediction 189 230 - -
Seca6g04763 321 MobiDBLite consensus disorder prediction 1 23 - -
Seca6g04763 321 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04763 Seca-Chr6 115144593 115145558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04763 21 298 Trihelix Transcription Factor Family AT3G14180 34.195 1.19e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca6g04763 Myb_DNA-bind_4 6.9e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04763 - - gmx:100785349 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04763 6 115144593 115145558 Seca6g04763 6 115144593 115145558 ECH