Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04753 ATGAAGAACACCGTGGTGGAGAGGTTCTCTGATTTCTACGAGAAGTGGATTTGGAAGGTGGAGGAGATCCTGCATCAGCTTCTGGAGGTGTCAAAGCAGAGAAAGGAGGTGGTCAAAACTGAACAAGAGCTGCAAGCACTGGTCTCCAAAGCCACAACCCACATCAAGGAATACTACACTGTCAAATGGGGTGCTGCTCATGAAGACGTTCTCGTCTTCTTCTCACCAACCTGGGTCACTCCTCTGGAGAATGCTTACATGTGGATGACTGGTTGGAAGCCTTCCTTGGTGTTCCGCCTCCTCAAGAAGGGTCCAACCATGACAGAGGAGCAGCAGAAGAAGGTAGAGGAGCTGAGAAAGAGGATCAGGATGGAGGAGGATAAGGTGGAGAGGGACATGGAGAGGCAGCAAGTGGCCATGGCTAACCCAAACATAGTGGACCTGGCAAAGCAGTCTGGCAGATCAATGAAGCAGGTGGGTGAGGGTGATGCTGATGCTGATGCTGCAACAGGGGTTGATGGGTTGGTGGATGTGGCCTTGAAGGGTGTCTTTGCAGGCTTGGAGAGGGTTATGAAGGCTTCTGATTGTGTCAGACTTAAGGCACTCAAGGGGGTTTTGGATGTGCTTGGTCCAATGCAGTCTGTGGAATTCTTGGTTGCATTTATAGCTATGAGGCTACGCCTGAGGCAATGGGGTAAGAAGAGAGACATGGCTGCTGGATCCATACTCAATCAGGAGGACAAGTGA 747 0.5087 MKNTVVERFSDFYEKWIWKVEEILHQLLEVSKQRKEVVKTEQELQALVSKATTHIKEYYTVKWGAAHEDVLVFFSPTWVTPLENAYMWMTGWKPSLVFRLLKKGPTMTEEQQKKVEELRKRIRMEEDKVERDMERQQVAMANPNIVDLAKQSGRSMKQVGEGDADADAATGVDGLVDVALKGVFAGLERVMKASDCVRLKALKGVLDVLGPMQSVEFLVAFIAMRLRLRQWGKKRDMAAGSILNQEDK. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04753 248 Coils Coil 108 135 - -
Seca6g04753 248 Pfam Seed dormancy control 27 102 IPR025422 GO:0006351|GO:0043565
Seca6g04753 248 Coils Coil 30 50 - -
Seca6g04753 248 ProSiteProfiles DOG1 domain profile. 6 238 IPR025422 GO:0006351|GO:0043565
Seca6g04753 248 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04753 Seca-Chr6 115050448 115051194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04753 43 229 bZIP Transcription Factor Family AT3G12250 27.128 1.45e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04753 - - gmx:100808459 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04753 6 115050448 115051194 Seca6g04753 6 115050448 115051194 ECH