Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04735 ATGAAGAACTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCAGCAGTGAATATTCTCCTCAAGAAAGTCCTTGAGGAAGGAATGAACCATTTGGTTTTTATCACATACCGTCTCTCAATTGCTACCATTTTCGTAGCCCCAATCGGTTACTTTTGGGAAAGAAATGGCAGACCTCGGCTAACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATTGTTGGCATGGTTGTAGTGAAATCCTTTCTTTGTAGGGCATCAGTCACTCAATACTTTTTCCTTCTGGGGATCCAATATACGTCTGCTACATTTGCTTGTGCTTTTGTCAACATGGTGCCTGTGGTCACGTTCATCATGGCTTTGCCATTTGGGTTAGAGACTGTGAACATCAAGTGCAACAGTGGGAGAGCGAAGATTCTTGGTACATTGGTGTGCGTAGGCGGCGCATTGTTGTTGACACTTTACAAAGGAAAGGCACTGTTTCATTTTTCTCATTCTTCTAAGTTAGCTGCTGCTTCTACAAGGACAACAGAGAAATGGACTATTGGTGTGATAGCTTTGATTTTGGGGACCCTGTTTTGGTCTTTTTGGTTCATTTTACAATCAAATATAAGCAAGAGATACCCATGCCAGTATTCTAGCACAGCCATCATGAGTTTCTTTGGAGCCATTCAATCAGCTGTCATTTGCTTTCTCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATAATTGCCATTCTGTATGCTGGAATGATTGGATCGGGTTTGTGTTTTGTGGGTATGTCATGGTGTGTCAAGAAGAGGGGTCCAGTGTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGTTATGGTTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAGTGTGATGGGATCCATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAGCAAGGAGATGAAGAATCGTTTGATTAAGTTAGTTCAAGAAGCTGAAGAAACCCCGGAACAAGAGCCCCAACCACAAATACAACACTTGACAGTGTCTTGTGATTCGCGGTGTCACTAA 1110 0.4153 MKNCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFVAPIGYFWERNGRPRLTFRILCYLFFSAIVGMVVVKSFLCRASVTQYFFLLGIQYTSATFACAFVNMVPVVTFIMALPFGLETVNIKCNSGRAKILGTLVCVGGALLLTLYKGKALFHFSHSSKLAAASTRTTEKWTIGVIALILGTLFWSFWFILQSNISKRYPCQYSSTAIMSFFGAIQSAVICFLTDHNLSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAVMVDIPVLHEQLYLGSVMGSILVMIGLYILLWGKSKEMKNRLIKLVQEAEETPEQEPQPQIQHLTVSCDSRCH. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04735 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Seca6g04735 369 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Seca6g04735 369 Pfam EamA-like transporter family 11 160 IPR000620 GO:0016020
Seca6g04735 369 PANTHER WAT1-RELATED PROTEIN 8 343 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04735 Seca-Chr6 114898990 114901725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04735 7 261 Nodulin-like Gene Family AT3G30340 49.425 1.27e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04735 - - gmx:100803670 615.92