Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04705 ATGGCAGCAACCAGGAAAGGCAAAGCCATAGGCATTGACCTTGGCACGACCTACAGTTGCGTTGCAGTGTGGCAACACAACCGCGTTGAGGTCATTCCAAATGAGCAAGGCAACCGCACCACCCCTTCTTACGTTGCCTTCACTGATACTGAAAGGTTATTGGGCGATGCTGCCATGAACCAAGTAGCTACCAATCCACACAACACCATTTTCGACGCCAAACGTTTGATCGGTCGTCGTTTCTCCGACCAATCAGTTCAACAAGACATGAAGCTCTGGCCTTTTAAGGTTGTCCCTGGCATCAGAGACAAGCCCATGATTGTGGTCACCTACAAAGGCGAAGAGAAGCATCTTGCTGCTGAAGAGATATCTTCGATGGTGCTGTCCAAGATGAAGGAGGTAGCTGAAGCTTATCTGGGTCATGCAGTGAAGCAAGCGGTGATCACTGTCCCTGCTTACTTCAACAACTCACAGAGACAGGCCACTAAGGATGCAGGGGAAATTGCTGGTTTCAATGTCATGAGGATCATCAACGAGCCAACTGCAGCTGCTATTGCTTACGGTTTGGACAAGAAGGGGTGGAGAGAGGGTGAGCAAAACGTGCTTGTGTTTGATCTTGGTGGTGGCACTTTTGATGTTTCCTTGGTGACCATTGATGAAGGGATGTTTAAGGTTAAGGCCACAGTGGGAGATACCCATTTGGGTGGTGTGGACTTTGATAACAATTTGGTCAACTATCTTGTGGATGTGTTTAAGAGAAAGTACAAGAAGGATGTTAGTGAGAATGCCAAAGCTCTGAGGAGGTTAAGGTCAGCTTGTGAAAAAGCTAAGAGGATACTGTCTTCAACTACCCAGGCCACTATTGAGCTTGACAACTTGTGTGGAGGGATTGATCTACATGGCACTGTTACAAGGGCTTTGTTTGAGGAATTGAACAAGGACTTGTTCATAAAGTGCATGGAGACTGTGGAAAAATGCCTTGTTGAGGCAAAGATTAATAAAAGACAAGTCCATGAGTTTGTTCTTGTTGGTGGATCTACTAGAATTCCAAAGGTTCAGCAACTTTTGAAGGACATGTTCTGTCTCAATGGCAAAGCCAAAGAGCTTTGTAAAAGCATTAACCCTGATGAAGCTGTGGCATACGGTGCAGCTGTTCAAGCAGCGATCTTGAGTGGTGAAGGAGACAAGAAAGTGGAGGACTTGTTGTTGCTTGATGTTATGCCTCTTAGTCTTGGGATTGAGACTGATGGGGGTCTCATGTCTGTGATGATTCCAAAGAATACCATGATTCCCACCAAGAAGGAAAGCGTTTTCTCTACTTTTTCTGATGATCAGAACAGTGTTTTGATCAAAGTGTATGAGGGAGAACGAGCAAAGACAGAGGATAACTTTTTTCTTGGGAAGTTTGAGCTCTCGGGGTTCTCTCCAGCACCAAAAGGAATCCCCCAGATCAATGTGTGCTTTGATGTAGATGTTGATGGAATTGTGGAGGTGACTGCTGAGGATAAGAGCACGAGGCTGAAAAAGAAGATCACGATCACTAACAAGAAGGGAAGGTTGAGCCCTGAAGAGATAAGGAGGATGGTGAGAGATGCAGAGAGGTACAAGGCAGATGATGAGGAAGTGAGGAAGAAGGTGAAAGCGAAGAACTTGCTTGAGAATTATGCTTATGAGATGAGGGGCAGAGTGAAGAAACTTGAGGAGGCAGTGGAGGAGACCATAGAATGGCTTGAAAGAAACCAATTGGCTGAAGCTGATGAGTTTGAGTTCAAGAAGCAGGAGTTGGAAAGGGATATGCATTTGCTGTAA 1809 0.4561 MAATRKGKAIGIDLGTTYSCVAVWQHNRVEVIPNEQGNRTTPSYVAFTDTERLLGDAAMNQVATNPHNTIFDAKRLIGRRFSDQSVQQDMKLWPFKVVPGIRDKPMIVVTYKGEEKHLAAEEISSMVLSKMKEVAEAYLGHAVKQAVITVPAYFNNSQRQATKDAGEIAGFNVMRIINEPTAAAIAYGLDKKGWREGEQNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNNLVNYLVDVFKRKYKKDVSENAKALRRLRSACEKAKRILSSTTQATIELDNLCGGIDLHGTVTRALFEELNKDLFIKCMETVEKCLVEAKINKRQVHEFVLVGGSTRIPKVQQLLKDMFCLNGKAKELCKSINPDEAVAYGAAVQAAILSGEGDKKVEDLLLLDVMPLSLGIETDGGLMSVMIPKNTMIPTKKESVFSTFSDDQNSVLIKVYEGERAKTEDNFFLGKFELSGFSPAPKGIPQINVCFDVDVDGIVEVTAEDKSTRLKKKITITNKKGRLSPEEIRRMVRDAERYKADDEEVRKKVKAKNLLENYAYEMRGRVKKLEEAVEETIEWLERNQLAEADEFEFKKQELERDMHLL. 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04705 602 Gene3D - 10 388 - -
Seca6g04705 602 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca6g04705 602 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 548 IPR029047 -
Seca6g04705 602 FunFam Heat shock 70 kDa 395 549 - -
Seca6g04705 602 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 548 597 IPR029048 -
Seca6g04705 602 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 553 IPR029047 -
Seca6g04705 602 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Seca6g04705 602 Gene3D Actin; Chain A, domain 4 235 318 - -
Seca6g04705 602 FunFam Heat shock 70 kDa protein 71 126 - -
Seca6g04705 602 Gene3D - 71 126 - -
Seca6g04705 602 PANTHER HEAT SHOCK PROTEIN 70KDA 9 571 IPR013126 GO:0005524|GO:0140662
Seca6g04705 602 FunFam Heat shock protein 70 10 199 - -
Seca6g04705 602 Gene3D - 192 370 - -
Seca6g04705 602 Coils Coil 578 598 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 209 219 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 373 393 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 481 497 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 146 166 - -
Seca6g04705 602 PRINTS 70kDa heat shock protein signature 400 419 - -
Seca6g04705 602 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Seca6g04705 602 Pfam Hsp70 protein 9 597 IPR013126 GO:0005524|GO:0140662
Seca6g04705 602 SUPERFAMILY Actin-like ATPase domain 198 390 IPR043129 -
Seca6g04705 602 FunFam Heat shock 70 kDa 235 318 - -
Seca6g04705 602 Gene3D - 549 600 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04705 Seca-Chr6 114609433 114611241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04705 1 596 Calmodulin-binding Proteins AT3G12580 71.148 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04705 K03283 - gmx:100788531 980.319