Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04704 ATGGCATCAAGCAGCAAAGGCAAAGCCATAGGCATTGACCTTGGCACAACCTACAGCTGCGTTGCAGTGTGGCAACACAATCATGTTGAGGTCATTCCAAATGAGCAAGGAAACCGCACCACTCCTTCCTTCGTTGCCTTCACTGATACCCAAAGGTTAACCGCCGAAGCTGCCATGAACCAAGTTGCCACCAATCCACACAACACCATTTTTGTTTGTTTTGATGTAAATGTTGATGGCATTGTGGAGGTGACTGCTGAAGATAGGACAACGACGCTGAAAAAGAAGATCACGATCACCAACACGCAGGGAAGGCTGAGCCCTGAAGAGATAAGGAGGATGGTGAGAGATGCAGAGAGATACAAGGCAGATGATGAGGAAATGAAGAAGAAGGTGAAGGCCAAGAACTTGCTTGAGAATTATGCTTATGAGATGAGGGCAAGAATGAAGAATTTTGAAAAGGCAGTGGAAGAGACCATAGAATGGCTTGAAAGAAACCAATTGGCAGAAGTTGATGAGTTTGAGTTCAAGAAGCAGGAATTGGAAAGGGATATGCATTCGCTGTCATTGTAA 573 0.452 MASSSKGKAIGIDLGTTYSCVAVWQHNHVEVIPNEQGNRTTPSFVAFTDTQRLTAEAAMNQVATNPHNTIFVCFDVNVDGIVEVTAEDRTTTLKKKITITNTQGRLSPEEIRRMVRDAERYKADDEEMKKKVKAKNLLENYAYEMRARMKNFEKAVEETIEWLERNQLAEVDEFEFKKQELERDMHSLSL. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04704 190 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 134 185 IPR029048 -
Seca6g04704 190 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca6g04704 190 Gene3D - 1 102 - -
Seca6g04704 190 Coils Coil 164 184 - -
Seca6g04704 190 Gene3D - 106 189 IPR029048 -
Seca6g04704 190 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
Seca6g04704 190 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca6g04704 190 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca6g04704 190 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca6g04704 190 SUPERFAMILY Actin-like ATPase domain 8 111 IPR043129 -
Seca6g04704 190 FunFam heat shock 70 kDa protein-like 3 143 - -
Seca6g04704 190 PANTHER HEAT SHOCK PROTEIN 70KDA 9 71 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04704 Seca-Chr6 114600687 114602431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04704 1 71 Calmodulin-binding Proteins AT1G16030 71.831 1.06e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04704 K03283 - api:100575047 180.644