Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04681 ATGGTTGTGGAAGATACCCCAAAATCTAGCATCACCGACGACCAAATCAGCAACAACCCTAGGGTTCTCGACGACAACGACGACCTCGAGGAAGGAGAGATCCTCAACGATGACGACTCCTCCGCCATTTCCAAGCCTCCCTCCGCCGTCGTCCGCCAACACCATCCCCTCGAGAATTCATGGACCTTCTGGTTCGATAACCCTTCCGCCAAATCCAAGCAATCCGCTTGGGGCAGCTCTATCCGATCCATCTACACCTTCGCCACCGTCGAGGAGTTTTGGAGCATTTACAATAACATACACCATCCTAGCAAGTTGGCTATGGGAGCAGATTTTCATTGTTTCAAGCATAAAATTGAACCGAAGTGGGAGGACCCAATCTGCGCCAATGGTGGGAAATGGACTATGACCTTTTCTAAAGGGAAATCTGATACCAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAACAATTTGATCATGGAGATGAAATTTGCGGAGCAGTAGTGAATGTCAGAAATAGGCAGGAGAAAATTGCTCTTTGGACTAAGAACGCTTCAAATGAAGCTGCTCAGGTAACATTCTTTTTTTCTTGA 597 0.469 MVVEDTPKSSITDDQISNNPRVLDDNDDLEEGEILNDDDSSAISKPPSAVVRQHHPLENSWTFWFDNPSAKSKQSAWGSSIRSIYTFATVEEFWSIYNNIHHPSKLAMGADFHCFKHKIEPKWEDPICANGGKWTMTFSKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQEKIALWTKNASNEAAQVTFFFS. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04681 198 FunFam Eukaryotic translation initiation factor 4E 47 196 - -
Seca6g04681 198 Pfam Eukaryotic initiation factor 4E 56 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca6g04681 198 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 195 IPR023398 -
Seca6g04681 198 MobiDBLite consensus disorder prediction 1 45 - -
Seca6g04681 198 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 33 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca6g04681 198 SUPERFAMILY eIF4e-like 45 192 IPR023398 -
Seca6g04681 198 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04681 Seca-Chr6 114341984 114344216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04681 1 195 Eukaryotic Initiation Factors Gene Family AT4G18040 67.000 3.76e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04681 K03259 - gmx:100793288 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04681 6 114341984 114344216 Seca6g04681 6 114341984 114344216 ECH