Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04675 ATGGGAAGGTTTAGTTCAAGTTATAGTAACTCTGATTCTGATTTCATTTATCGTGGGGTTCTACTTCCCCTTTTTTTACTGTCACAGATTTCCTTTCAACTCACAACGTGTGGCTCCATAGTGCAGTTCCTTCCTGGATTCCAGGGACCCCTTCCTTTTCTGCTTGAAACCGGGTATGTGGGAGTGGGTGAAACAGAGGATGTACAAGCCTTCTATTACTTCATTGAGTCAGAGAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACCGGTGGACCTGGTTGCTCTGCCTTGTCTGGTCTTGTCTTTGAAATAGGTCCACTTGCATTCAAATACGAGGAATATAATGGGAGCCTCCCTAGTTTGGTGTTGAGGCCACACTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCAGTTTCCACGGGGTTTACTTATGCCACAACAGAGTCTGCTGCTCAACGAAGCGACTGGTTACTAGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTGTCCAATGAAGTTTACATTGGTGGTGATTCTTACTCTGGCATTCCTATTCCAGTAATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTTCAGCCATGGATCAATCTCCAGGGATACCTGCTAGGGAATGCCTTAACAACTGGAAGGGAGAAAAACTATGCAATTCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATACGAGTCACTGCAAAAGAATTGTAAAGGAGAGTATGTAAATGTAGACACCAGGAATGTATTGTGTTCAAGAGATATGAAATCATACAACGAGGCTACATCAGGACTTAATACGGCACATATTTTGGACCCTTTATGCGAGTGGCTTGATAATACTCAAGTTTCTCAGAGGAGATCTCTAATTAAGAAATATCCCTTCAAGTACCTCAATACTCATCTCAAATTGCCACCCTTAAGCTGTCGGAGTTATGCATATTTCCTTTGCGGTTATTGGGCCAATGATGATAGTGTTCGCAAAGCACTGAACATACCTAAGGGAAGTATTGGGAAGTGGCATCGTTGTAGCTTCAATATACCTCACAAAAGGGAAATCTCTAGCAGCTTTGAGTATCATGTAAATCTAAGTAGGAAAGGCTATCGCTCACTAATATACAGCGGCGATCATGACATGTCAATTCCATTCTTGGCGACTCAAGCATGGGTAAGATCTTTAAATTACTCCATTGGTGGAGGCCACACAGCTCCGGAGTTCAAGCCTGAAGAATGCTTTGCCATGTACAGTAGGTATGTGGGAGTGGGTGAAACAGAGGATGTACAAACTTTCTATTACTTCATTGAGTCAGAGAACGATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACCGGTGGACCTGGTTGCTCTGCCTTGTCTGATCTTGCCTTTGAAATAGATTTGCCAGTTTCCACGGGGTTTACTTATGCCACAACAGAGTCTGCTGCTCAACGAAGCGACTGGTTACTAGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTGTCAAATGAAGTTTACATTGGTGGTGATTCCTACTCTGGCATTCCTATTCCAGGGTACCTGCTAGGGAATGCCTTAACAACTCGAAGGGAGAAAAACTATCAAATCCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGAGTCACTGCAAAAGAATTGTAAAGGAGAGTATGTAAATGTAGACACCAGGAATGTATTGTGTTCAAGAGATATGAACTCATACAACGAGGCTATATCAGGACTTAATAAGGCACATATTTTGGAGCCTTCATGCCAGTGGCTTGATAATACTCAAGCTTCTTGGAGGAGATCTCTAATTAAGAAATATCCCTCCAAGTACCTCAATACTCATCTCAAATTGCCAACCTTAAGCTGTCGGAGTTATGTATATTTCCTTTGCGGTTATTGGGCCAACGATGATAGTGTTCGCAAAGCACTGCACATACATAAGGGAAGTATTGGGAAGTGGCGTCGTTGTACCTCCAATATACCTCACAAAAGGGACATCTCTAGCAGCTTTGAGTATCATGTAAATCTAAGTAGGATAGGCTATCGTTCACTAATATACAGTGGCGATCATGACATGAATATTACATTCTTGGCGACTCAAGCATGGGTAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCAATGGCATACAAATGGTCAAGTTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCAACTGTGAAGGGTGGAGGCCACACAGCTCCGGAGTACAAGCCTGAAGAATGCTTTGCCATGTACAGTAGGTGGATATCTAATAGGGCTTTGTAG 2412 0.4221 MGRFSSSYSNSDSDFIYRGVLLPLFLLSQISFQLTTCGSIVQFLPGFQGPLPFLLETGYVGVGETEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKYEEYNGSLPSLVLRPHSWTKVSSIIFVDLPVSTGFTYATTESAAQRSDWLLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPVIVQEISQGNEKGVQPWINLQGYLLGNALTTGREKNYAIPFAHGMGLISDELYESLQKNCKGEYVNVDTRNVLCSRDMKSYNEATSGLNTAHILDPLCEWLDNTQVSQRRSLIKKYPFKYLNTHLKLPPLSCRSYAYFLCGYWANDDSVRKALNIPKGSIGKWHRCSFNIPHKREISSSFEYHVNLSRKGYRSLIYSGDHDMSIPFLATQAWVRSLNYSIGGGHTAPEFKPEECFAMYSRYVGVGETEDVQTFYYFIESENDPKEDPLMLWLTGGPGCSALSDLAFEIDLPVSTGFTYATTESAAQRSDWLLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPGYLLGNALTTRREKNYQIPFAHGMGLISDELYESLQKNCKGEYVNVDTRNVLCSRDMNSYNEAISGLNKAHILEPSCQWLDNTQASWRRSLIKKYPSKYLNTHLKLPTLSCRSYVYFLCGYWANDDSVRKALHIHKGSIGKWRRCTSNIPHKRDISSSFEYHVNLSRIGYRSLIYSGDHDMNITFLATQAWVRSLNYSIVDDWRQWHTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECFAMYSRWISNRAL. 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04675 803 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 PRINTS Carboxypeptidase C serine protease (S10) family signature 770 783 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 Gene3D alpha/beta hydrolase 51 438 IPR029058 -
Seca6g04675 803 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 416 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 SUPERFAMILY alpha/beta-Hydrolases 41 441 IPR029058 -
Seca6g04675 803 Gene3D - 662 802 - -
Seca6g04675 803 Gene3D alpha/beta hydrolase 439 486 IPR029058 -
Seca6g04675 803 Gene3D alpha/beta hydrolase 487 626 IPR029058 -
Seca6g04675 803 SUPERFAMILY alpha/beta-Hydrolases 435 801 IPR029058 -
Seca6g04675 803 FunFam Carboxypeptidase 657 802 - -
Seca6g04675 803 Pfam Serine carboxypeptidase 426 487 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 Pfam Serine carboxypeptidase 547 800 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 Pfam Serine carboxypeptidase 45 424 IPR001563 GO:0004185|GO:0006508
Seca6g04675 803 FunFam Serine carboxypeptidase-like 19 35 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04675 Seca-Chr6 114278701 114291927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04675 665 803 Calmodulin-binding Proteins AT2G22960 66.187 1.20e-58 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04675 K16296 - ini:109153033 835.869