Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04633 ATGGGGAAGCTAATAACCACTACCAAACCTCTCATCCTCCAATCAAAGCTCCTCTGTTTTTCTCTGCTCTACCTCTTCACCACTCTTTTCCTTGCTCTTTACACCACTCTCTCCCAATCCAAATGCCTCTTCAGATCATCCCCTTTGGATCCCATCCAGAATTCTCTCTTCTCTTACCCTTCTTCCTACGGAGAGCACAAGTATGCTGTTTCAACCGCCCGTTCCACCTGCTCTTCCCCTGTCCTCTTTTCAGATTACTGGGATGTTGTGAAGGAGATCGAGAATTTTCGCAAGAACTCTCCTGCTCACTCAGGGGTTCTGAGGTATATGCAGGGGAATGCGGATAGTTTTGGTGGGAATCTTAGCACCCTTACGAGGTTTTCTTATTTTGATCATCAAAATGATACCACAGAGGTTCCATGTGGATTTCTGAAGAAGTTTCCAATCAGTGATTTTGATCGAATTGCCATGGAAAAATGTGACAAGATAGTTGTAGTTTCAGCAATCTTCAATGACCATGACAAAATCCGGCAACCGAAGGGGCTTGGGTCCAAAACACTGGAAGATGTGTGTTTCTTCATGTTCGTAGATGACATTACCCTCAAAGGTCTTGAACATCATGGATTGATTTCAATACAATCAAGAGAATACAAAATTGGTGTATGGAGGATTGTGAAGGTTGAGAAAGGGGATTTGTATCAGAACCCAGCAATGAATGGGATTATACCAAAATATTTGGTCCATAGGCTATTTCCAAATTCCCTATTCAGCATTTGGATAGATGCAAAGTTGCAACTTATGGTTGATCCATTGCTGTTGATTCATTCACTTGTTATATCTGAGAATGTAGACATGGCTATATCAAAACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGGTGGAAGAAATGGTGGGATGTCAATGCCTTGAAGGTGCAAATGGAGACATACTGTGAAAATGGACTGCAACCATGGAGTCTCAGCAAGCAACCCTATGCTTCAGGTATGTGCCAGATAGTGCACTGA 1041 0.4246 MGKLITTTKPLILQSKLLCFSLLYLFTTLFLALYTTLSQSKCLFRSSPLDPIQNSLFSYPSSYGEHKYAVSTARSTCSSPVLFSDYWDVVKEIENFRKNSPAHSGVLRYMQGNADSFGGNLSTLTRFSYFDHQNDTTEVPCGFLKKFPISDFDRIAMEKCDKIVVVSAIFNDHDKIRQPKGLGSKTLEDVCFFMFVDDITLKGLEHHGLISIQSREYKIGVWRIVKVEKGDLYQNPAMNGIIPKYLVHRLFPNSLFSIWIDAKLQLMVDPLLLIHSLVISENVDMAISKHPYYVHTMEEAMATARWKKWWDVNALKVQMETYCENGLQPWSLSKQPYASGMCQIVH. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04633 346 Pfam Protein of unknown function (DUF616) 113 340 IPR006852 -
Seca6g04633 346 PANTHER ALKALINE CERAMIDASE-RELATED 10 342 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04633 Seca-Chr6 113839022 113841459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04633 - - gmx:100809755 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04633 6 113839022 113841459 Seca6g04633 6 113839022 113841459 ECH
Seca6g04633 6 113839022 113841459 Seca12g05957 12 151400901 151411105 PCT