Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04622 ATGGGTTTCAATGTTTCTCCGAATAGTGAGGAGGAAAGGAGGAACAGAGGAATCGCCACCAATGATCACCCTTACTATGGCACCTTTCAAGGCGTCGCCAATTACTATCCACCTGCTTCCTATGGTGACCCCTATGCATATTACCAACGTCAAGGACAAGGTGGATACCACGTTGTTCCAGGAAGGCCCGTAAGAGAACATCGTCTTCCTTGTTGTGGACTTGGTTTAGGTTGGCTCTTGTTTATAATTGGTTTCTTTCTTGGCGGTGTTCCTTGGTACATCGGAACTTTCATTCTTCTATGTGTTCAAATGGATTACCGAGAAAAGCCTGGGTTAATTGCATGCACAGTTGCTTCCTTCGTTGTTATGATAGCCATTACACTTGGTGCCACACATCCAAATATCGCAAAGTTGGCATGA 420 0.45 MGFNVSPNSEEERRNRGIATNDHPYYGTFQGVANYYPPASYGDPYAYYQRQGQGGYHVVPGRPVREHRLPCCGLGLGWLLFIIGFFLGGVPWYIGTFILLCVQMDYREKPGLIACTVASFVVMIAITLGATHPNIAKLA. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04622 139 MobiDBLite consensus disorder prediction 1 21 - -
Seca6g04622 139 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 10 132 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04622 Seca-Chr6 113716470 113719524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04622 9 131 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.197 5.19e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04622 - - gmx:102662831 152.91