Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04568 ATGCATTTGCAGATATTCCAATGGTTGGCAAGTATGCCTTTGGAGCTGGAGGGATATATACGCCCTGGGTGTACGATCCTGACAGCTTTTATTGCAATGCCAAAAATCATGTGGATAAATTTACTCAATGACCCTCTGTACTTTGTGCGTGATCTTGTTGCTCCCAGAAAGATGCTATCTGGAAGAGGCACCACACTAATTTATCTGAATGACATGATCTTCCGTGTTGTGAAAGATGGATCTTCTGTGACAAAAGTCGAGGTAAACATGCAGGCACCAAGACTTCACTATGTTCATCCCACATGCTTTGAAGCTGGCAAACCCATGGAATTTGTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAATATCTGAAGTATGAGTATTGCGTTCCATCTCCACATAACAGGACTGAAGACAATATTTATTGTTCTTTTGACAATCAGTTATACAAGATATGTGTCCCTCATACAGAGGAAAATTTCTTTGGGCCTGCATTTATTGAGGTGGAGAACGAATCTGGGTTATCAAACTTTATTCCTGTACTCATTGGGGATAAAGAAATTTGCACTGAAATGAAGACATTGCAGCAGAAATTAGATATATTGCCCCGTTCTAAACAATTCCAGTCTGCATCTGGTGGTTCTATCTGCAGCTCATGTGAAGCTTTTGCACTAAGACACACATCTTCATCAGACTTACTTGTAGATATAGCATGGTTGCTGAAGGATCCAACTTCCGGAAATTTTGACAGAGTGATGACAGCTTCACAAATTCAAAGATATTGTTATCTGTTAGATTTTCTAATATGCAACGATTCAACAGTCATTTTGGGAAAAATATTACCAAATTTGATAACCTTAATAAAAAGCATGAAATCCAATTTTGTGATTAATAGGATTAGTGATGTTGATCTGATGCAACTACTAAAATGCATGCAAAATGCTAGAGATGCCATTTATCAAAAACATCAGAAAGGTGGAGGTGTAGTTGCGCACTCAGGAACGCAACGCTTTGAACTACCTCAGAGCATCTGCCAAGATAACATGCTATCAGTTGTTAAAGTCAACTGTCAGGGTATCCCAACTGGAGCAGATGCGAAGTTGGGAGTTCTGAGAAATCCCACTTCTAATGACAAAAATGAAAGCATACCACTTTTGAAGAGGGAGATTATAATGAATGTGGAAGAGGTCCCTAGAAGATGTGACCGTCGGTATGTTACCAGGGGATTCTTGAGCTCTCGACCAGCTATTTTTGTGGTTGTTTCAGTTGCTGTTTGTCTAGGGGTATGTGTATCCATACTTCATCATGGGAGGGTTAGTGAGTTGGCATTATCCATTAGAAGGTGTTTGTTTAACTATTAG 1392 0.3958 MHLQIFQWLASMPLELEGYIRPGCTILTAFIAMPKIMWINLLNDPLYFVRDLVAPRKMLSGRGTTLIYLNDMIFRVVKDGSSVTKVEVNMQAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLKYEYCVPSPHNRTEDNIYCSFDNQLYKICVPHTEENFFGPAFIEVENESGLSNFIPVLIGDKEICTEMKTLQQKLDILPRSKQFQSASGGSICSSCEAFALRHTSSSDLLVDIAWLLKDPTSGNFDRVMTASQIQRYCYLLDFLICNDSTVILGKILPNLITLIKSMKSNFVINRISDVDLMQLLKCMQNARDAIYQKHQKGGGVVAHSGTQRFELPQSICQDNMLSVVKVNCQGIPTGADAKLGVLRNPTSNDKNESIPLLKREIIMNVEEVPRRCDRRYVTRGFLSSRPAIFVVVSVAVCLGVCVSILHHGRVSELALSIRRCLFNY. 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04568 463 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 53 286 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04568 Seca-Chr6 113261346 113267836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04568 4 457 SBP-box Gene Family AT5G18830 42.251 4.18e-118 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04568 - - gmx:100776034 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04568 6 113261346 113267836 Seca6g04568 6 113261346 113267836 ECH