Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04527 ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTGGATGTAGATTTCTTTACTGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATTCACACACGGGAGAAAAGGTTGCTATAAAGAAAATCAATGATATATTTGAACATGTTTCTGATGCCACTCGTATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCGGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGACCTAACACCAGAACATTACCAGTTTTTCCTCTATCAGCTTCTTCGGGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATTTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCAAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCGCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCAATAGATATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTGACCGGAAAACCTCTTTTTCCTGGGAAGAATGTTGTCCATCAACTGGACCTCATGACTGATCTTCTTGGAACACCATCTCCTGAAGCCATTGGCAGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAGCAAGTTCCTTTCCAACAGAAATTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCCCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACTAAGGAAGATGTACGAGAACTTATATACCGAGAGATTCTTGAGTACCATCCAAAGATGTTAAAGGAATTTCTCGAGGGAGCAGAACCAACAGGTTTCATGTATCCAAGTGCCGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAGGGAGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCGTTACCCCGACCATGTGTGTTGTATTCTGATAACTCAGTACACAATAATACGGCTGAGGTTGCTGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACCACCCGTAGATAGAAGTAGTGCTATCCCCATGACTCGGCTACCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCAAGGCCTGGAAAAGTTGTTGGTTCAGTAATGCGATACAACAACTGTGGGGTGGCAGTGACAGCAGAGGCTGAACAACGGAGGGTGGTTAGGAATCCATCTGTTTCAGCTCAGTATGCTGCTTCAAGCTGTTCATATCCTAGGAGAAACCCAACCTATAAAAATGAGAGGGCAGAAGATGATGGTGGGATTGAAGGTTCTAATGGATTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTTGCTGCTGCTCAAGGTGGAGCTGGTGGTCAGTGTCCGCGGACTCTCCCTTTCTCCATGTTTCGAAGGCTCATCTGCTCCTCTCTCTCCCTTCTTCCAATTCCAAAAAGGAACAACTTCTCCTTCCCTTTACCCCTTCTCACCCAAACCCGTTCCTTTCACAACACCAAACTCTCCCAAATGGGGGATGCTCGGAGGCCCTCATCGGTCCCCATCCCGACGGTGGACAAGGCAGATCGCTCGGAGCTCCTCCGTGCCCTAGAAGCCTCAATGGGTTCGCCCTTCAGCTCCGAACCCCTCTTCTCCAACCCCAACCCTCTCGTCATCGTCATCAGCGGCCCCAGCGGTGTCGGCAAAGACGCTCTCATCTCCCGCCTCCGCGAATCCCGCAGCGGCCTCCACTTCGTCGTCACCGTCACCAGCCGCCCCCGCCGCCCCGGCGAGGTGGACGGCAAGGACTACTTCTTTGTCTCCAAGGACGAGTTCCTTGGAATGGTTGAGAGGGAAGAGCTTCTGGAGTACGCCTTGGTGTATGGAGACTACAAGGGCGTTCCCAAGCAGCAGATTCGGGAGTACATGGCGAAAGGATGCGACGTCGTTTTGAGGGTTGATATCCAGGGTGCTCAGACGCTGAGGAAGGCGCTGGGGAAGTCGGCGGTTTTCGTGTTCCTTGTGGCGGAGAGTGAGCTGGCGATGGTGGAGAGGCTGGTGGATCGGAATACTGAGACTGCAGAGTCGTTGTTGGTGAGGATTAGCACGGCGAGGGAGGAGATGAAACATGTGAAGAACTTTGATTATGTCGTGGTGAATGCGAAAGGGAAACTTGAGAATGCGGTGCAGTTGGTGGAGTCTATTATTGATGCTGAGAAAGCTAAGGTCCGTCAAAGGACTGCTCTTATATGA 2556 0.4722 MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDSHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIGRVRNEKARRYLSSMRKKKQVPFQQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSVHNNTAEVADDLSKCCIKEVEKPPVDRSSAIPMTRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQYAASSCSYPRRNPTYKNERAEDDGGIEGSNGLQPKPQYMARKVAAAQGGAGGQCPRTLPFSMFRRLICSSLSLLPIPKRNNFSFPLPLLTQTRSFHNTKLSQMGDARRPSSVPIPTVDKADRSELLRALEASMGSPFSSEPLFSNPNPLVIVISGPSGVGKDALISRLRESRSGLHFVVTVTSRPRRPGEVDGKDYFFVSKDEFLGMVEREELLEYALVYGDYKGVPKQQIREYMAKGCDVVLRVDIQGAQTLRKALGKSAVFVFLVAESELAMVERLVDRNTETAESLLVRISTAREEMKHVKNFDYVVVNAKGKLENAVQLVESIIDAEKAKVRQRTALI. 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04527 851 SMART gk_7 656 841 IPR008145 -
Seca6g04527 851 FunFam Mitogen-activated protein kinase 111 339 - -
Seca6g04527 851 NCBIfam guanylate kinase 659 838 IPR017665 GO:0004385|GO:0006163
Seca6g04527 851 MobiDBLite consensus disorder prediction 517 543 - -
Seca6g04527 851 Gene3D - 659 830 IPR027417 -
Seca6g04527 851 FunFam Mitogen-activated protein kinase 15 119 - -
Seca6g04527 851 Pfam Guanylate kinase 659 839 IPR008145 -
Seca6g04527 851 FunFam Guanylate kinase 1 688 747 - -
Seca6g04527 851 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Seca6g04527 851 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Seca6g04527 851 Gene3D Guanylate Kinase phosphate binding domain 688 749 - -
Seca6g04527 851 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Seca6g04527 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 843 IPR027417 -
Seca6g04527 851 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g04527 851 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Seca6g04527 851 CDD STKc_TDY_MAPK 24 361 - -
Seca6g04527 851 ProSitePatterns Guanylate kinase-like signature. 691 708 IPR020590 -
Seca6g04527 851 CDD GMPK 659 775 - -
Seca6g04527 851 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Seca6g04527 851 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Seca6g04527 851 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g04527 851 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g04527 851 ProSiteProfiles Guanylate kinase-like domain profile. 657 838 IPR008144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04527 Seca-Chr6 112907771 112916301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04527 1 559 MAP Kinase Gene Family AT5G19010 80.492 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca6g04527 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04527 - - gmx:100814013 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04527 6 112907771 112916301 Seca6g04527 6 112907771 112916301 ECH