Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04451 ATGGATGAGGCTACACAATCTAATGCTGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGATTATGGGGTGACCTCATATTATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCTAAGGGTGGAAACATCACTAGGGAACCTGGTCCAGTTAAGGGTGGAACAATTGTTATTGCCTATGTGGAGGATCCTGATGGTTACACTTTTGAGCTCATCCAAAGAGCTTCAACCCCTGAGCCACTCTGTCAAGTAATGCTTCACGTTAGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTAGTAAACGTTTATAGACCTGACAATTACGATATAGCTATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTGTTGGAGCTGATATATAAACATGGTGTCACTGAGTACACCAAGGGAAATGGCTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCTGAGGTAGTGAACATAGTCACACAAGAGCTAGGAGGGACAATTACTCGGCAACCAGGGCCAATTCCTGGCATTAACACAAAGATAACTTCTTTCTTAGATCCAGATGGGTGGAAAATTGTCTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 711 0.4318 MDEATQSNAELLEWPKKDKRRFLHAVYRVDYGVTSYYIGTGFGHFAIATPDVYKLVEDIRAKGGNITREPGPVKGGTIVIAYVEDPDGYTFELIQRASTPEPLCQVMLHVSDLERSIKFYEKALGMKVVNVYRPDNYDIAMLGYAEEHETTVLELIYKHGVTEYTKGNGYAQVAIGTDDVYKSAEVVNIVTQELGGTITRQPGPIPGINTKITSFLDPDGWKIVLVDNQDFLKELE. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04451 236 ProSitePatterns Glyoxalase I signature 1. 105 126 IPR018146 GO:0004462|GO:0046872
Seca6g04451 236 ProSitePatterns Glyoxalase I signature 2. 39 51 IPR018146 GO:0004462|GO:0046872
Seca6g04451 236 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 103 228 IPR029068 -
Seca6g04451 236 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 39 93 IPR004360 -
Seca6g04451 236 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 105 223 IPR004360 -
Seca6g04451 236 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 102 228 IPR037523 -
Seca6g04451 236 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 96 IPR037523 -
Seca6g04451 236 PANTHER LACTOYLGLUTATHIONE LYASE 30 236 - -
Seca6g04451 236 Gene3D - 99 236 IPR029068 -
Seca6g04451 236 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 33 98 IPR029068 -
Seca6g04451 236 Gene3D - 29 98 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04451 Seca-Chr6 112073037 112080906 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04451 K01759 - gmx:100794901 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04451 6 112073037 112080906 Seca6g04451 6 112073037 112080906 ECH
Seca6g04451 6 112073037 112080906 Seca12g00175 12 1601513 1604302 ECH
Seca12g00175 12 1601513 1604302 Seca6g04451 6 112073037 112080906 PCT