Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04450 ATGATGAATACTCTGCTACAAAGCGACACGCCCAGTGTTGGAGATTGTTCTAGTTTGTCGCTCTTTCTCTTGCAGCCTTCCTTTGCACTCACTCAAGTCACACACTCTGTAACCCCATTTGTTCAAGTTGATCCAGTTTTTCCATCCTATTGCCTCACTTTTATATCATACATAACATTTGCATCCACATTGAATATGGCTGAGGCTGCACAATCTAATGCTGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAATGTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCGGAAGAGAAATACTCCAATGCTTTTCTTGGATTTGGCCCTGAACAATCCCATTTTGTTGTGGAATTGACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTGTCGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCTAAGGGTGGAAACATCACTAGGGAGCCTGGTCCAGTTAAGGGTGGGACATCTGTTATTGCCTTTGTGAAGGATCCTGATGGCTACTCTTTTGAGCTCATTCAAAGAGCTTCAACCCCTGAGCCATTGTGCCAAGTAATGCTTCGCGTTGGTGATTTAGAGCGCTCAATTAAGTTCTATGAAAAGGCTTTGGGTTTGAAGTTGGTAAAGAAGGTTGATAGGCCTGAACACAAGTACACTATAGCTATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCTGAGGTAGTCAACATAGTCACACAAGAACTTGGAGGAAAGATTACTCGGCAACCAGGTCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGATCCAGATGGATGGAAAACTAATTCTGAGCTGAAATAA 1035 0.4271 MMNTLLQSDTPSVGDCSSLSLFLLQPSFALTQVTHSVTPFVQVDPVFPSYCLTFISYITFASTLNMAEAAQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAVATPDVYKLVEDIRAKGGNITREPGPVKGGTSVIAFVKDPDGYSFELIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKLVKKVDRPEHKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITSFLDPDGWKTNSELK. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04450 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 85 213 IPR029068 -
Seca6g04450 344 PANTHER LACTOYLGLUTATHIONE LYASE 67 339 - -
Seca6g04450 344 NCBIfam lactoylglutathione lyase 87 212 IPR004361 GO:0004462|GO:0046872
Seca6g04450 344 FunFam Lactoylglutathione lyase 83 212 - -
Seca6g04450 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 216 344 IPR037523 -
Seca6g04450 344 ProSitePatterns Glyoxalase I signature 1. 219 240 IPR018146 GO:0004462|GO:0046872
Seca6g04450 344 ProSitePatterns Glyoxalase I signature 2. 153 165 IPR018146 GO:0004462|GO:0046872
Seca6g04450 344 Gene3D - 59 212 IPR029068 -
Seca6g04450 344 CDD GlxI_Ni 88 208 - -
Seca6g04450 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 86 210 IPR037523 -
Seca6g04450 344 Gene3D - 213 341 IPR029068 -
Seca6g04450 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 88 207 IPR004360 -
Seca6g04450 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 338 IPR004360 -
Seca6g04450 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 337 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04450 Seca-Chr6 112067756 112072017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04450 219 337 Calmodulin-binding Proteins AT1G08110 29.861 2.22e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04450 K01759 - gmx:100794901 541.191