Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04436 ATGGACAAGGGATGGGGACTCACTCTTGATTCTTGTTCTTCTCCTTCCCACCCTTTCTTTTCTCCCAAACAGCCATCTGCACCTCTGTCCAATCTCACACACGATAGGATGTTCCCCATTTTGGGATTCCCAGTCAACCTTAGCCGCGCCACCGCCACCAACAGGGAAGACGATGACAACCGGAAAGTGGTCGGTGAAGTGGACTTCTTCTCTGACAGAACCAAGTCATCACCTGCACACGATGACCATGCTAAACCCAACTTCATCGCTACCTCCGTCAAGAAGGAGATTTCTCCCGATGAAAAACCTCTCAATCTCCACCTAAATACTGGTCTGCAACTTCTTACTGCAAACACTGGAAGTGACCAATCTACGGTGGATGATGGGGTTTCATCAGATGCTGAAGATAAGCGAGCAAAGACCTCTGAGCTTGCTCAGTTGCAAGTGGAGCTTGAACGCATGAATGCAGAGAACAAGAAACTGAAAGAGATGCTCAGCCATGTGAGCGGTAACTACACGGCTTTGCAGATGCATCTTGCCGCATTAATGCAAAAGAACCAGCGCACAGAGAGCACTGAAAATGAGGGAAAAGGTGAGGAGAAAAACCATGGAGGAATGGTACCGAGACAGTTTCTTGAGATTGGTCCCAGTGGAAGGGCTGAAGTAGATGATCAAGTATCCAATTCTTCTTCAGATGAAAGAACGCGATCGAACACGCCTCAAAACAATCACGCTCAAGTTGGAACAAGAGATCATCACTTGATCAGAAACAAAACTGAATTGGGTAGAGAGGAGAGTCCAGACTCAGAATCACAAGGTTGGGCTTCCAATAAGCTTCAGAAATTGAACCCCTCCAACTCCAATTCTATTGATCAATCCACTGCAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCCCGATCAGAGGCTTCCATGGTATGTATTATCATTAACATTATAATTAATTATTAA 978 0.4601 MDKGWGLTLDSCSSPSHPFFSPKQPSAPLSNLTHDRMFPILGFPVNLSRATATNREDDDNRKVVGEVDFFSDRTKSSPAHDDHAKPNFIATSVKKEISPDEKPLNLHLNTGLQLLTANTGSDQSTVDDGVSSDAEDKRAKTSELAQLQVELERMNAENKKLKEMLSHVSGNYTALQMHLAALMQKNQRTESTENEGKGEEKNHGGMVPRQFLEIGPSGRAEVDDQVSNSSSDERTRSNTPQNNHAQVGTRDHHLIRNKTELGREESPDSESQGWASNKLQKLNPSNSNSIDQSTAEATMRKARVSVRARSEASMVCIIINIIINY. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04436 325 MobiDBLite consensus disorder prediction 249 267 - -
Seca6g04436 325 MobiDBLite consensus disorder prediction 190 206 - -
Seca6g04436 325 MobiDBLite consensus disorder prediction 185 294 - -
Seca6g04436 325 MobiDBLite consensus disorder prediction 231 248 - -
Seca6g04436 325 Coils Coil 137 171 - -
Seca6g04436 325 MobiDBLite consensus disorder prediction 269 294 - -
Seca6g04436 325 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 110 315 IPR044810 GO:0003700
Seca6g04436 325 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04436 Seca-Chr6 111939956 111942417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04436 1 315 WRKY Transcription Factor Family AT1G62300 42.241 1.37e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04436 - - pvu:PHAVU_006G147800g 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04436 6 111939956 111942417 Seca6g04436 6 111939956 111942417 ECH
Seca4g04588 4 84584399 84586892 Seca6g04436 6 111939956 111942417 ECH