Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04336 ATGTCATTCAAATCTGTGGAGGAATTCAAAGACTTTTACAAAAAATATGCCTTTCAACAAGGGTTTGGTTTTGTGATAAGAACCTCAAGAAAGAACTCTTCTGGCTGTGTTTGTAACCTTGTATTAGCATGTGCACGCCAAGGACACAGCAAATCAACCGTGAAGAACTCTTTCAAAAGTGTGTTATCAATCAAAGCTGATTGTGGAGCACATGTTACTGCTTGCTTGAAGTCTGATGGGTTGTATTACATAACCAAGGTCATTCTTCATCATTCTCATGATCTGAGCCCAAGCAAAGCAAGATTGTTCAAGTCAAACAAAGAGATGAGCATGCATGTAAGGAGAGTCTTGGATGTCAATGATAGGGCAGGGGTGAGATTGAACAAAAGCTTTAATTCCATTCTTATGAATGACTCTTTTAAAGTGTGA 429 0.3846 MSFKSVEEFKDFYKKYAFQQGFGFVIRTSRKNSSGCVCNLVLACARQGHSKSTVKNSFKSVLSIKADCGAHVTACLKSDGLYYITKVILHHSHDLSPSKARLFKSNKEMSMHVRRVLDVNDRAGVRLNKSFNSILMNDSFKV. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04336 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 135 - -
Seca6g04336 142 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04336 Seca-Chr6 111057058 111058333 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g04336 FAR1 9.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04336 - - psat:127087122 135.191