Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca6g04311 | ATGTGGCCGGGGAAGCATTCAATTTTCTTCTTCTCATCACTCATTCTTCTTTTTCTGTTTCAAGCAGCACCTACTTTTGCTACAAAAAAATCATACATAGTGTACCTGGGAGCGCATGATCATGGTCCAGGAGTCACACAAGCTGATTTTGATCGAGTCACAGAAAATCATCATGCATTACTTGGATCCTATTTGGGAAGTTCTGAGAAATCAAAAGAAGCAATGCTCTATTCTTACACAAAGCACATCAATGGCTTTGCAGCTGTCCTAGAAGAGGAAGAGGCTGCTAAACTTGCAAAGCATCCAAATGTTGTGTCAGTATTCTTAAACCAAGGAAGAAAACTACAAACTACACATTCCTGGGAATTCATGTCTCAGGAATATAATGGTCTCACTCTTCCCAATTCCTTGTTTCAAAAGGCCAGATTTGGTGAAGATACTATTATAGGACACCTTGACACTGGTAATTTTGCTTTCCACTGCTTGTTTTTAGCTTATGGTGCATGGCCAGAATCTCCCAGCTTTAGTGATGATGGGATAGGACCCATTCCTTCAAGGTGGAAAGGAACCTGTGAGAATGATATCACTGGCTTCCGTTGTAACAGAAAGCTCATAGGGGCAAGGTACTTCAACAAAGGGTATGCTTCTTATTTAACTGAAGAGTCAGTGAGAAACAGTACTTTTAACTCAGCAAGAGACTATGAGGGTCATGGTTCTCACACTCTATCAACATTAGGAGGGAACTTTGTTGATGGAGCAAATGTCTTAGGCATGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAAGGTCTGCTGGCCACCAATTGATGACAATGAGTGCTTTGATTCTGATATCTTAGCAGCCTTAGATACAGCTATATCTGATGGGGTTGATGTTATTTCCCTTTCTATTGGAGGGTCTCCTATGGATTATTTCAATGATGCTATTGCTATTGGAGCATTTCATGCTACTATGAATGGTATCACTGTAGTATGTGCTGGTGGAAATTCTGGACCAGGACCTGGAACTGTCTCAAATACTGCACCTTGGATCATTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTGAGTCTATTGTTGAACTCTCCAATGGACAGGTTTTCAAGGGATATACTCTTTCAAATGCTGTGCCAGAAGACAAACTTTACCCACTCATTAGAGCTGATGTGGCCAAAAAGGATGAGGCGCAAGATTATGAAGCTGTGTTTTGTAAGGCAGGAACAATTGACCCAGAGAAGGCCAAGGGAAAAATATTGGTTTGTCTTAGAGGTGACAATGAAAGAGCAGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGTTGGGATGATTCTTTACAATGATGAGTATACCCCTGAAGACTATAAGTCCCTGGCTACTCCTCATTTCCTTCCAACATCAGAAGTTAGCTATAATGAGGGTCTTGCCATTTTATCCTACATCAATTCAACCATGAACCCAATGGCATATTTGCATCCACCCAAAACCTTGTTGCAGATAAAGCCTTCTCCAACTATGGCATTTTTCTCCTCAAGAGGTCCCAACATTGTCACACCAGAGATCCTCAAGCCTGATATTACTGCTCCTGGTGTGAACATTATTGCTGCCTATTCACAAGGTACTAGCCCTTCAGATTTGGACTCTGATAACCGGAGGATTCCTTTTATCACCATGTCTGGAACATCCATGGCCACCCCTCATGTGGCTGGAGTTGTTGGTCTTCTCAAGACACTACACCCTAACTGGAGTCCAGCAGCTATCAAATCTGCAATAATGACAACTACTATGACATGGGACAACACTTTTAAACCAATGGTTGATGACAGTTTAGCTATGGCAACACCATATGACTATGGCACTGGACACATCACACCAAATTGGGCAATGGATCCTGGTTTGGTCTATGACTTAACATCCACTGATTACCTAAACATGCTTTGTGCAAGTGGTTATAACCAAACTCAGATAGCAAGTTTCTATGGTGCTCCTTATAATTGTCCTTATGTGGTCAAAATCCTGGACTTCAACTACCCTGCAATAGTAATACCAAAACTCTATGGCACAGTTACTTTGACTAGGAGGGTTAAAAATGTTGGTAAACCAGGCATTTATGCAGCAAGGATCCGTGTACCACCAGGTCTTTCAGTATCTGTGGAGCCTAGGATCTTGAAATTTGACAGGATTGATGAAGAGAAAAGCTTTAGCTTAACATTTGAAGTGACAAGACCAGGTGTTGCTACAGTCTATGGGGAGCTAATTTGGTCAGATGGCTTACATTATGTGAGGACTCCAATTATAGTTGGTGGTGTTATGGCTTAG | 2361 | 0.4193 | MWPGKHSIFFFSSLILLFLFQAAPTFATKKSYIVYLGAHDHGPGVTQADFDRVTENHHALLGSYLGSSEKSKEAMLYSYTKHINGFAAVLEEEEAAKLAKHPNVVSVFLNQGRKLQTTHSWEFMSQEYNGLTLPNSLFQKARFGEDTIIGHLDTGNFAFHCLFLAYGAWPESPSFSDDGIGPIPSRWKGTCENDITGFRCNRKLIGARYFNKGYASYLTEESVRNSTFNSARDYEGHGSHTLSTLGGNFVDGANVLGMGNGTAKGGSPKARLATYKVCWPPIDDNECFDSDILAALDTAISDGVDVISLSIGGSPMDYFNDAIAIGAFHATMNGITVVCAGGNSGPGPGTVSNTAPWIITVGASTLDRKFESIVELSNGQVFKGYTLSNAVPEDKLYPLIRADVAKKDEAQDYEAVFCKAGTIDPEKAKGKILVCLRGDNERAEKSLVAFEAGAVGMILYNDEYTPEDYKSLATPHFLPTSEVSYNEGLAILSYINSTMNPMAYLHPPKTLLQIKPSPTMAFFSSRGPNIVTPEILKPDITAPGVNIIAAYSQGTSPSDLDSDNRRIPFITMSGTSMATPHVAGVVGLLKTLHPNWSPAAIKSAIMTTTMTWDNTFKPMVDDSLAMATPYDYGTGHITPNWAMDPGLVYDLTSTDYLNMLCASGYNQTQIASFYGAPYNCPYVVKILDFNYPAIVIPKLYGTVTLTRRVKNVGKPGIYAARIRVPPGLSVSVEPRILKFDRIDEEKSFSLTFEVTRPGVATVYGELIWSDGLHYVRTPIIVGGVMA. | 787 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca6g04311 | 786 | Pfam | Fibronectin type-III domain | 688 | 781 | IPR041469 | - | |
| Seca6g04311 | 786 | Pfam | Peptidase inhibitor I9 | 31 | 115 | IPR010259 | - | |
| Seca6g04311 | 786 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 120 | 643 | - | - | |
| Seca6g04311 | 786 | PRINTS | Subtilisin serine protease family (S8) signature | 144 | 163 | IPR015500 | - | |
| Seca6g04311 | 786 | PRINTS | Subtilisin serine protease family (S8) signature | 233 | 246 | IPR015500 | - | |
| Seca6g04311 | 786 | PRINTS | Subtilisin serine protease family (S8) signature | 573 | 589 | IPR015500 | - | |
| Seca6g04311 | 786 | Pfam | PA domain | 417 | 491 | IPR003137 | - | |
| Seca6g04311 | 786 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 116 | IPR037045 | - | |
| Seca6g04311 | 786 | SUPERFAMILY | Subtilisin-like | 115 | 647 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca6g04311 | 786 | CDD | PA_subtilisin_like | 374 | 505 | - | - | |
| Seca6g04311 | 786 | FunFam | subtilisin-like protease SBT1.5 | 367 | 512 | - | - | |
| Seca6g04311 | 786 | Gene3D | Peptidase S8/S53 domain | 166 | 656 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca6g04311 | 786 | Pfam | Subtilase family | 196 | 613 | IPR000209 | GO:0006508|GO:0008236 | |
| Seca6g04311 | 786 | Gene3D | - | 660 | 783 | - | - | |
| Seca6g04311 | 786 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 32 | 781 | IPR045051 | - | |
| Seca6g04311 | 786 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 574 | 584 | IPR023828 | - | |
| Seca6g04311 | 786 | Gene3D | - | 367 | 512 | - | - | |
| Seca6g04311 | 786 | SUPERFAMILY | PA domain | 411 | 500 | IPR046450 | - | |
| Seca6g04311 | 786 | FunFam | Subtilisin-like protease SBT1.5 | 146 | 380 | - | - | |
| Seca6g04311 | 786 | FunFam | Subtilisin-like protease SBT5.3 | 20 | 116 | - | - | |
| Seca6g04311 | 786 | CDD | Peptidases_S8_3 | 114 | 608 | IPR034197 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca6g04311 | Seca-Chr6 | 110827185 | 110831161 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca6g04311 | 15 | 781 | Subtilisin-like Serine Gene Family | AT5G59810 | 57.458 | 0.0 | 892 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca6g04311 | - | - | gmx:100808488 | 1058.13 |