Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g04300 | ATGTATCCAAGATTGATACACCCTCACGAAGGGATTGTTGGGCAGGAAGATATGCAAGGTGGGGGTGCCTCTAACCACAAGGGAGACCCATGTCTTGTTTTGACGGCTGATCCAAAACCTCGCCTTCGTTGGACTCAGGACCTCCATGAACGATTCGTTGATGCAGTCACCCAGCTTGGGGGTGCTAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATATCAGGTTCATATCTTTTAGAAAGCCCTGGTACTGATAATACTTCTCCAAAGTTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATTTGCAAGTGGAGGCAGAGAAGCACCTGCAGATTCGCCAGGAAGCTGAGCGAAGATATATGGCCATGCTTGAAAGAGCCTGCAAGATGCTGGCTGATCAATTTCTTGGTGCTACAGTTATAGACACAGATAGCCAAAAGTTTCAAGGAATTGGAAGTAAAGCACCAAGAAGTTCCATGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTGGCTGGAGTGAATGTCCCAGAAGAAGAAATACCACCAAGTCTCCCACCCCAAAGGGCTGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGAGTTCTGGTGGATTGACTCTAGAAGGATCTCCAGGTGGGGGCAAAAGGAGGATGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGACTGAAGCTAAGATGAAAACTCAAGCCATCAATGTAGCCCATGGAAATTCTCATGGAATAACTAGGTATGGCATGTAG | 939 | 0.4547 | MYPRLIHPHEGIVGQEDMQGGGASNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGISGSYLLESPGTDNTSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQEAERRYMAMLERACKMLADQFLGATVIDTDSQKFQGIGSKAPRSSMVDPLGFYSLPSAEVAGVNVPEEEIPPSLPPQRADCSTESCLTSHESSGGLTLEGSPGGGKRRMLGMDSMAAPLIWTEAKMKTQAINVAHGNSHGITRYGM. | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g04300 | 312 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 36 | 96 | IPR017930 | - | |
Seca6g04300 | 312 | MobiDBLite | consensus disorder prediction | 110 | 132 | - | - | |
Seca6g04300 | 312 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Seca6g04300 | 312 | MobiDBLite | consensus disorder prediction | 244 | 262 | - | - | |
Seca6g04300 | 312 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 39 | 94 | IPR006447 | GO:0003677 | |
Seca6g04300 | 312 | Pfam | MYB-CC type transfactor, LHEQLE motif | 137 | 182 | IPR025756 | - | |
Seca6g04300 | 312 | Pfam | Myb-like DNA-binding domain | 42 | 92 | IPR001005 | - | |
Seca6g04300 | 312 | Gene3D | - | 38 | 96 | - | - | |
Seca6g04300 | 312 | MobiDBLite | consensus disorder prediction | 235 | 275 | - | - | |
Seca6g04300 | 312 | FunFam | Myb family transcription factor | 38 | 96 | - | - | |
Seca6g04300 | 312 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 7 | 263 | IPR044848 | GO:0003700 | |
Seca6g04300 | 312 | SUPERFAMILY | Homeodomain-like | 39 | 95 | IPR009057 | - | |
Seca6g04300 | 312 | MobiDBLite | consensus disorder prediction | 115 | 131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g04300 | Seca-Chr6 | 110741002 | 110747606 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g04300 | 24 | 255 | G2-like Transcription Factor Family | AT3G24120 | 44.628 | 2.84e-62 | 197 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Seca6g04300 | Myb_DNA-binding | 5.3e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g04300 | - | - | gmx:100782369 | 559.296 |