Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04294 ATGGTAGTGTGTTCCTTGGCCTCAGGGCTCTCTTTTGGATCAAGTACAAAGTGTGTCATGGCCACCCTATGTTTCTTAAGGTTCTGGCTTGGTTTTGGGATTGGCGGTGACTACCCTCTTTATGCTACAATCATGTCTGAATATGCTAACAAAAAGACTCGAGGGGCATTCATAGCTGTAGTGTTTGCTATGCAAGGATTTGGAATTTTGGCTGCATTGAAAATATGGTTATTAGTGTACTGTGCAGAAGATAATGGTGGAACGATTCGTTGCGGAAGTAAACAGTGCAAACTTTTTTTTTTCATTCAATTTGGTCCCTTATATTAA 327 0.4037 MVVCSLASGLSFGSSTKCVMATLCFLRFWLGFGIGGDYPLYATIMSEYANKKTRGAFIAVVFAMQGFGILAALKIWLLVYCAEDNGGTIRCGSKQCKLFFFIQFGPLY. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04294 108 Gene3D MFS general substrate transporter like domains 1 106 IPR036259 -
Seca6g04294 108 Pfam Sugar (and other) transporter 3 104 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca6g04294 108 SUPERFAMILY MFS general substrate transporter 2 79 IPR036259 -
Seca6g04294 108 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 108 IPR020846 GO:0022857
Seca6g04294 108 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04294 Seca-Chr6 110679958 110680284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04294 1 85 Inorganic Solute Cotransporters AT2G32830 76.471 7.21e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04294 K08176 - cpap:110815917 134.806