Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04272 ATGTCTAACCCCATCAAGGAGGAGGAGGTTGTGTGCGTCACCGGCGCCAACGGCTTCATCGGTTCATGGCTGGTTCGAACCCTATTGGCGAATGAGAGCCCACGCTACACCATCCACGCCACCATCTTCCCTGGTTCTGACCCTTCTCACCTCTTCACCCTCCACCCCGAAGCCAAATCCCGCCTCACTCTCTTCCCCGCCGACATCCTCGACGCTGCCGCCGTATCCCGCGCCGTCGAAGGCTGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACACTCGACGACCCCACGGACCCTCAAAAGGAGCTGGTCGAACCCGCGGTGCAGGGAACCCTAAACGTTCTAGAAGCCGCGAAGCGCGTCGGCGTGAGGCGCGTGGTTCTCACCTCCTCGATCTCAGCCATTGTGCCGAACCCTAAGTGGCCGGCGAACAAGGTCATCGACGAGTCGTCGTGGACGGACGTGGAGTACTGCGAGTCGCGGCAGAAGTGGTACCCGGTGTCGAAGACGGAGGCAGAGAGGGCGGCGTGGGAGTTCAAGGAGAAGCACGGCGTCGACGTGGTGGCGATTCATCCTGCTACGTGTCTAGGACCGCTGCTGCAGCCGTCGCTAAATGCTAGCTCCGCCGTGCTGCAGAGGCTGATGATGGGATCGAAGGACACGCAAGAGTGTTATTGGTTGGGTGCGGTGCATGTTAAGGACGTTGCAAAAGCTCATGTTTTGCTCTATGAGACTCCAACTGCTGCGGGTAGATATCTATGTACCAATGGTATCTACCAGTTTTCTAGTTTTGCTGACACTGTCTCTGAATTGTACCCTGATTTCCCTATTCACAGCCAAAAGCACAAGCTGAAGTCTCTTATGCTAGTCATATTTACCAATCTTGTCACCATTTACATCTTCACTGGTCCATTTAGTTTTATGTATCACTCCTCCTTGAGTCCTAGTGACTCAAACTCTATCTTGCAGGAACTCAACTCCACCAAAGCTCAACTTGCAGCCAGTCACTCACTCTTGTCTGAGCTACAGCACAGACTCAACTCTACTAACCTACTTGTCCAGGCCTTGCTTATTGATCTTACCCGCCAACAAGACAAGCAATCTAACAGTGCAGATCAGAACCCTGTGAGTGTGAAGCTTGGAAATGGTGAGCTCACTATTGCACTTGGTTCTCACAAGCTCCCTTTTGGACACTCACCAAGGATAGGATCAGATGAGATTCACATGCCTGTTGGCACAGCCTGCTTGAAGTTCCATGAGGAGTTAAACCAATATATGACATATGACATTGGAGGGGAATGCCCTATAGATGATGTACTTGCACAAAGGCTCATGCTCAAAGGGTGTGAACCACTCCCTCGTAGGAGATGCCACCCCAAGTCTCCTACAAATTATGTAGAGCCAAAGCCTTTGCCAGATAGCCTTTGGACAACCCCACCAGACACCAGCATTATCTGGGATCCTTATACTTGTAAAAGCTACCAGTGCCTCGTTGACAGAGAGAATAAGCCAGGGTTGTTTGACTGCAAAGGTTGCTTTGATTTGCAGGGCAAAGAGAAGAGTAGGTGGCTCTTTGATGATGGTGGACTTAATTTTGGAATAGACCAAGTTCTTGCAACAAAAGCTGCAGGAACAATTCGTATTGGACTTGACATTGGTGGTGGAACTGGAACATTTGCTGCCAGAATGAGGGAAAGGGATGTAACAATCATTACAAGCACACTGAATTTGGATGGTCCATTCAACAACATGATTGCATCAAGGGGTTTAATACCAATGCATATCAGCATCTCTCAAAGGTTTCCTTTCTTTGAAAACACAATGGATATTGTGCACTCCATGCATGTCATAGGAAACTGGATGCCAGACACCATGCTTGAGTTTGTGTTGTATGATATATACAGGGTGTTGAGGCCAGGGGGTCTTTTCTGGCTTGATCATTTCTTCTGCTTTGGTTCACAAGTCAACAAAACTTACGTGCCAATGTTAGATCGAGTTGGATTCAATAAATTGAGATGGCATGTTGGAATGAAACTTGATCATGGGGTTCACAAGAATGTATGGTACATTTCTGCTCTGATGGAGAAACCAATGATTTGA 2103 0.4941 MSNPIKEEEVVCVTGANGFIGSWLVRTLLANESPRYTIHATIFPGSDPSHLFTLHPEAKSRLTLFPADILDAAAVSRAVEGCSGVFHVASPCTLDDPTDPQKELVEPAVQGTLNVLEAAKRVGVRRVVLTSSISAIVPNPKWPANKVIDESSWTDVEYCESRQKWYPVSKTEAERAAWEFKEKHGVDVVAIHPATCLGPLLQPSLNASSAVLQRLMMGSKDTQECYWLGAVHVKDVAKAHVLLYETPTAAGRYLCTNGIYQFSSFADTVSELYPDFPIHSQKHKLKSLMLVIFTNLVTIYIFTGPFSFMYHSSLSPSDSNSILQELNSTKAQLAASHSLLSELQHRLNSTNLLVQALLIDLTRQQDKQSNSADQNPVSVKLGNGELTIALGSHKLPFGHSPRIGSDEIHMPVGTACLKFHEELNQYMTYDIGGECPIDDVLAQRLMLKGCEPLPRRRCHPKSPTNYVEPKPLPDSLWTTPPDTSIIWDPYTCKSYQCLVDRENKPGLFDCKGCFDLQGKEKSRWLFDDGGLNFGIDQVLATKAAGTIRIGLDIGGGTGTFAARMRERDVTIITSTLNLDGPFNNMIASRGLIPMHISISQRFPFFENTMDIVHSMHVIGNWMPDTMLEFVLYDIYRVLRPGGLFWLDHFFCFGSQVNKTYVPMLDRVGFNKLRWHVGMKLDHGVHKNVWYISALMEKPMI. 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04272 700 Pfam NAD dependent epimerase/dehydratase family 11 249 IPR001509 -
Seca6g04272 700 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 548 673 IPR029063 -
Seca6g04272 700 CDD AdoMet_MTases 551 651 - -
Seca6g04272 700 Gene3D - 3 299 - -
Seca6g04272 700 CDD FR_SDR_e 11 290 - -
Seca6g04272 700 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 280 IPR036291 -
Seca6g04272 700 FunFam Dihydroflavonol reductase 8 296 - -
Seca6g04272 700 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 282 699 - -
Seca6g04272 700 Pfam Methyltransferase domain 551 645 IPR013216 GO:0008168
Seca6g04272 700 Gene3D Vaccinia Virus protein VP39 525 690 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04272 Seca-Chr6 110471268 110476102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04272 8 279 Monolignol Biosynthesis Gene Families AT2G02400 68.015 4.96e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04272 - - gmx:102664598 740.725