Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04250 ATGCTATCTTCGAATGTTGTTCCATCATCATCCTCTGTCACTTTCAGCAAACCCAATCACCAGTTTTTCATTAATGCATCTCCCATTTTCAAACCAAATCTTCTCTGCAGGTTTCACAGAGCCACCTCTCAGCTTCATGAATCAGGCCTCAAAAGTTCCAAACTTTCTCTCATGCCCACATCCCAGATCCAACATTCAATCACAAATTTAAGCTCTTTTAACAGATTCCTCTCACACCCATTTGAGTTCTCAGCAAAACCCAGACTCCAAATCGTTAAGGCAGCATCTGATGCTAATCCTGAGGGAGAAAGTGTAGCTCCCACTAATCCCAAGTCTAAGAATTTCAAACTTGCACTTGTATTTGGGATGTGGTATTTCCAAAACATTGTTTTCAACATTTACAACAAGAAAGCGTTAAACATATTCCCATTCCCATGGCTTCTTGCCTCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTCTGGTCCTTTAAGCTTCAACCTTGTCCAAAAATCTCAAAACCTTTCATCATGGCTCTCCTTGGTCCTGCTTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACCCATGTCATTAAATCTGCAGAACCAGTTTTCTCTGTCATTTTTTCTTCTGTCCTTGGTGATAGATATCCCATTCAGGTTTGGCTTTCAATTCTACCTATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCTCTCATTAGCAATGTTGGTTTTGTATTGAGGAACATCTATTCTAAAAGAAGTTTACAAAGTTTCAAGGAAGTTGATGGCTTGAACTTATATGGCTGGATTACTATAATTTCATTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGATCCCAGTGGATCCCAGGGTATTACAAGGCAATTGAAGCTATAGGCAAACCATCCACATTTTATATATGGGTGTTGGTGTCTGGGGTGTTCTACCATCTCTATAACCAATCATCTTACCAAGCCCTGGATGAAATTAGCCCATTAACTTTCTCTGTTGGAAACACAATGAAGAGAGTGGTGGTGATTGTATCTTCAGTTTTGGTGTTCAGGAATCCAGTTAGACCACTTAATGGCCTTGGATCTGCCATTGCCATTCTTGGGACTTTCCTGTATTCCCAGGCAACATCTGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1269 0.4074 MLSSNVVPSSSSVTFSKPNHQFFINASPIFKPNLLCRFHRATSQLHESGLKSSKLSLMPTSQIQHSITNLSSFNRFLSHPFEFSAKPRLQIVKAASDANPEGESVAPTNPKSKNFKLALVFGMWYFQNIVFNIYNKKALNIFPFPWLLASFQLFVGSIWMLVLWSFKLQPCPKISKPFIMALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQSFKEVDGLNLYGWITIISLLYLFPVAIFVEGSQWIPGYYKAIEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATSAKKAKKIEGEKSS. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04250 422 PANTHER SOLUTE CARRIER FAMILY 35 116 411 - -
Seca6g04250 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 406 - -
Seca6g04250 422 Pfam Triose-phosphate Transporter family 116 405 IPR004853 -
Seca6g04250 422 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 116 415 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04250 Seca-Chr6 110274428 110275720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04250 24 420 Antiporters AT5G17630 69.212 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04250 K15283 - gmx:100101869 729.169