Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04229 ATGATGCGTGTATTGGTAGCACTTTGGTGTGCAACATTAACAGTCTCAAATGCTGAGTTGAGTACCACGTTTTACAGTGAAACATGTCCATCTCTGAATGATATTGTGTTTGATAATATCTTCCAGACTTCCCTCTCTGATCCCCGCATCGGTGCCAGCCTCATCAGACTTCACTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTATTGAACAACACTGCTACAATAGAAAGCGAGCAAGATGCGTTGCCAAATATAAACTCATTGAGGGGTTTGGATGTCATCAATAACATCAAGACAGCAGTGGAAGCTGATTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTTCAGCTCAAGTGGCCTCTGTTTTGGGAGGAGGTCCCTCATGGGCAGTTCCACTAGGAAGAAGGGACAGCTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCAGCACCTTTCTTCACATTGGATCAACTTAAAGATGCCTTTTCTGTTCAAGGTCTCAACACTCTTGATTTAGTCACACTCTCAGGCGCCCATACATTTGGAAGAGCTCACTGCAGCACATTCAATAATCGATTATACAATTTTAGTGGCACTGGAAATCCTGATCCAACTCTAGACACAAGTTACTTAGAAGTATTGCGTGAGATATGCCCTGAGAATGCAACAGAGAACAACCTCACTAATTTGGACCTGACCACACCTGATCAATTTGATAATAATTACTACTCCAATCTTCAGAGCCAGAAGGGGTTACTTCAGAATACCATTGACATTGTGAATAGTTTCAGCAGTGACCAAGATCTCTTCTTTGACAACTTTATAGAATCAATGATAAAAATGGGTAACATTGGAGTGATAACAGGGGATGAAGGAGAAATTCGATTACAATGTAATTTTGTGAATGGGGATGATGGCTCCTCTAGTGCAGTACTAGCACTTTGGTGTGCAACATCAACAGTCTCAAATGCTGAGTTGAGTACCACATTTTACAGCAAAACATGTCCAAATCTGAATGATATTGTGTTTGATAATATCTTCCAGACTTCCCTCTCTGATCCCCGCATCGGTGCCAGCCTCATCAGACTTCACTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTACTATTGAACAACACTGCAACCATAGAAAGCGAGCAAGATGCATTGCCAAATATGAACTCATTGAGGCGTTTGGATGTCATCAATAACATCAAGACAGCAGTGGAAGCTGTTTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTTCAGCTCAAGTCGCCTCTGCTCTAGGAGGAGGTCCCTCATGGCCAGTTCCACTAGGAAGAAGGGATGGCTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCAGCACCTTTCTTCAATTTGGATCAACTTAAAGCTGCCTTTGCTGCTCAGGGTCTCAACACTCTTGATTTAGTTACACTCTCAGGTGCTCATACATTTGGAAGAGCTCACTGCAGCTTATTCATTAATCGATTATACAATTTTAGTGGCACTGGAAATCCTGATCCAACACTGGACACAACTTACTTAGAATTATTGCGTGAGATATGCCCTGAGAATGCAACTGAAAACAACATCACTAATTTTGACCTGACCACACCAGATCAATTTGATAACAAGTACTACTCCAATCTTCAGAGCCAGAAGGGATTACTTCAGAATACCATTGACATTGTCAATAGCTACAGCAGTGACCAAGATCTCTTCTTTAACAACTTTATAGAGTCAATGATAAAAATGGGTAATATTGGAGTGTTAACAGGGGATGAAGGAGAAATCCGATTGCAATGTAATTTTGTGAATGGTGACTCCTCCTGCTGTGTATTGGTTGTGGTAATTGGAGCACTTCCTTTTCCATCAAACGCACAGCTTGATCCGTCGTTTTACAGGAATACATGTCCGAAGGTGCATTCAATTGTACGCGAAGTCGTGAGGGCAGTTTCGAAGAAAGATCCCCGTATGCTTGCCAGTCTCGTTAGGCTTCACTTCCATGATTGTTTTGTTCAAGGCTGTGATGCATCCATTTTGTTGAACAACACCGCTACAATCGTGAGCGAACAAGAAGCTTTTCCAAATAACAACTCCATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACAGAAGTAGAAAAAGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTGAAATATCTTCCGTTCTGGCACACGGTCCTGATTGGAAAGTTCCTCTGGGAAGAAGGGATAGTCTAACAGCAAACCGAACCCTTGCTAATCTAAATCTTCCAGGTCCTTCCTTCAGTCTTGATCAACTTAAAAAAGCCTTTTCCGATCAACGCCTTGACACTACCGATCTAGTTGCACTCTCTGGTGCTCATACATTTGGCAGGTCTCACTGCTCTTTATTCCAAGACCGATTGTACAATTTCAACAACACTGGCAAACCCGACCCAACTCTTGATACAACTTACTTACAAGAATTGCGTAAAATTTGCCCCAATGGTGGATCTGGCACTAACCTTGCCAATTTTGACCCAACCACTCCTGATACACTTGATAAGAACTATTACTCCAATCTTCAAGTTAAAAAGGGGTTGCTTCAAAGTGACCAAGAGTTGTTCTCAACACCCCGTGCAGATACCATTAACATTGTCAACAAGTTCGCTAGTAGCCAAGATGCTTTCTTTGAGAGTTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGTGTCCTAACTGGGAACAAAGGAGAAATCCGAAAACATTGCAATTTTGTTAACAAGAAATCTGTTGAAGAAGATCTAGCTAGTGTGGCCTCTAAGGAATCATCAGAGGAGCGTATGGTTAGCTCAATCTAA 2922 0.4165 MMRVLVALWCATLTVSNAELSTTFYSETCPSLNDIVFDNIFQTSLSDPRIGASLIRLHFHDCFVQGCDGSVLLNNTATIESEQDALPNINSLRGLDVINNIKTAVEADCPATVSCADILAISAQVASVLGGGPSWAVPLGRRDSLTANRTLANQNLPAPFFTLDQLKDAFSVQGLNTLDLVTLSGAHTFGRAHCSTFNNRLYNFSGTGNPDPTLDTSYLEVLREICPENATENNLTNLDLTTPDQFDNNYYSNLQSQKGLLQNTIDIVNSFSSDQDLFFDNFIESMIKMGNIGVITGDEGEIRLQCNFVNGDDGSSSAVLALWCATSTVSNAELSTTFYSKTCPNLNDIVFDNIFQTSLSDPRIGASLIRLHFHDCFVQGCDGSVLLNNTATIESEQDALPNMNSLRRLDVINNIKTAVEAVCPATVSCADILAISAQVASALGGGPSWPVPLGRRDGLTANRTLANQNLPAPFFNLDQLKAAFAAQGLNTLDLVTLSGAHTFGRAHCSLFINRLYNFSGTGNPDPTLDTTYLELLREICPENATENNITNFDLTTPDQFDNKYYSNLQSQKGLLQNTIDIVNSYSSDQDLFFNNFIESMIKMGNIGVLTGDEGEIRLQCNFVNGDSSCCVLVVVIGALPFPSNAQLDPSFYRNTCPKVHSIVREVVRAVSKKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQEAFPNNNSIRGLDVVNQIKTEVEKACPNTVSCADILALAAEISSVLAHGPDWKVPLGRRDSLTANRTLANLNLPGPSFSLDQLKKAFSDQRLDTTDLVALSGAHTFGRSHCSLFQDRLYNFNNTGKPDPTLDTTYLQELRKICPNGGSGTNLANFDPTTPDTLDKNYYSNLQVKKGLLQSDQELFSTPRADTINIVNKFASSQDAFFESFKASMIKMGNIGVLTGNKGEIRKHCNFVNKKSVEEDLASVASKESSEERMVSSI. 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04229 973 FunFam Peroxidase 650 794 - -
Seca6g04229 973 SUPERFAMILY Heme-dependent peroxidases 334 624 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 Gene3D Peroxidase, domain 2 157 289 - -
Seca6g04229 973 Gene3D Peroxidase, domain 2 784 927 - -
Seca6g04229 973 Gene3D Peroxidase, domain 2 471 603 - -
Seca6g04229 973 Gene3D - 24 310 - -
Seca6g04229 973 CDD secretory_peroxidase 646 947 IPR033905 GO:0004601|GO:0042744
Seca6g04229 973 ProSiteProfiles Plant heme peroxidase family profile. 19 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 656 675 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 739 749 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 805 817 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 880 897 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 758 773 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 720 733 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 864 879 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 680 700 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Plant peroxidase signature 922 935 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 ProSiteProfiles Plant heme peroxidase family profile. 646 948 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 CDD secretory_peroxidase 19 309 IPR033905 GO:0004601|GO:0042744
Seca6g04229 973 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Seca6g04229 973 ProSitePatterns Peroxidases proximal heme-ligand signature. 493 503 IPR019793 -
Seca6g04229 973 FunFam Peroxidase 784 927 - -
Seca6g04229 973 Gene3D - 338 624 - -
Seca6g04229 973 Pfam Peroxidase 43 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 Pfam Peroxidase 663 912 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 Pfam Peroxidase 357 577 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 ProSiteProfiles Plant heme peroxidase family profile. 333 624 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 FunFam Peroxidase 157 289 - -
Seca6g04229 973 SUPERFAMILY Heme-dependent peroxidases 646 948 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 FunFam Peroxidase 23 165 - -
Seca6g04229 973 FunFam Peroxidase 471 603 - -
Seca6g04229 973 Gene3D - 651 948 - -
Seca6g04229 973 PRINTS Haem peroxidase superfamily signature 553 568 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Haem peroxidase superfamily signature 365 379 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Haem peroxidase superfamily signature 427 444 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Haem peroxidase superfamily signature 445 457 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 PRINTS Haem peroxidase superfamily signature 493 508 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 FunFam Peroxidase 337 480 - -
Seca6g04229 973 SUPERFAMILY Heme-dependent peroxidases 20 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 ProSitePatterns Peroxidases proximal heme-ligand signature. 806 816 IPR019793 -
Seca6g04229 973 CDD secretory_peroxidase 333 623 IPR033905 GO:0004601|GO:0042744
Seca6g04229 973 PANTHER PEROXIDASE 72-RELATED 644 947 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04229 973 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Seca6g04229 973 ProSitePatterns Peroxidases active site signature. 365 376 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04229 Seca-Chr6 110080676 110100122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04229 632 948 Peroxidase AT5G06720 55.521 8.74e-118 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04229 - K00430 gsj:114367725 875.544