Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04227 ATGAATTTATCCTCCGTTGGTGTAGTCTCTGCTCTGGTTGTGGTAATTGGAGCAGTACTACTACCTTTGTCCTCAGATGCACAGTTAGATCCGTCATTCTACAATGATACTTGTTCCGATCTCCATTCAATCGTACGTGGCGTCCTCACTAATGTCTCTCAATCTGATCCCCGAATGCTTGCCAGTCTCATCAGGCTCCACTTCCATGACTGTTTCGTTCAAGGCTGTGATGGATCAATTCTGTTGAACAACACTGCAACGATAGCGAGTGAGCAAGATGCAGCGCCAAATAACAACTCCATTAGAGGTTTGGATGTTGTCAATCAGATCAAAACGGCCCTCGAAAATGCTTGTCCTAATACAGTTTCTTGTGCCGATATACTTGCCCTTGCTGCTGAAATCTCTTCGGATCTGGCTAATGGTCCTGTTTGGCAAGTACTATTGGGAAGAAGGGATAGTTTAACAGCAAATCAAACCCTTGCTGCTCAAAATCTTCCAGCCCCCACTTTCAATCTCACTCAACTTAAATCCTCATTCTCTGCTCAAGGTCTCAATACTACTGATTTAGTTGCGCTCTCAGGTATGAAATTTGTGCTCATACAATTGGTAGAGGCCAATGCCGCTTTTTTGATAATCGATTATACGATTTCAACAACACTAGCAGTCCTGATCCAACTCTCAACACAACCTATTTACAAACACTTCAAGCAATATGTCCCAATGGTGGACCTGGCACCAACCTCACCAATTTGGACCCAATCACTCCTGATACTTTTGACTCCAAATACTACTCTGATCTTCAGCTTCTCATGGGCTTGTTTCAGAGTGACCAAGAGCTGTTTTCCACAACCGGTGCAGATACTATTGACATTGTCAATAGTTTCAGCAGTAACCAAACCCTTTTCTTTGAAAACTTTAAGGCTTCAATGA 930 0.4301 MNLSSVGVVSALVVVIGAVLLPLSSDAQLDPSFYNDTCSDLHSIVRGVLTNVSQSDPRMLASLIRLHFHDCFVQGCDGSILLNNTATIASEQDAAPNNNSIRGLDVVNQIKTALENACPNTVSCADILALAAEISSDLANGPVWQVLLGRRDSLTANQTLAAQNLPAPTFNLTQLKSSFSAQGLNTTDLVALSGMKFVLIQLVEANAAFLIIDYTISTTLAVLIQLSTQPIYKHFKQYVPMVDLAPTSPIWTQSLLILLTPNTTLIFSFSWACFRVTKSCFPQPVQILLTLSIVSAVTKPFSLKTLRLQ. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04227 309 Pfam Peroxidase 47 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 Gene3D Peroxidase, domain 2 166 196 - -
Seca6g04227 309 ProSiteProfiles Plant heme peroxidase family profile. 28 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 FunFam Peroxidase 32 178 - -
Seca6g04227 309 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PANTHER PEROXIDASE 72-RELATED 26 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04227 309 Gene3D - 32 165 - -
Seca6g04227 309 SUPERFAMILY Heme-dependent peroxidases 28 194 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04227 Seca-Chr6 110047200 110050252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04227 11 194 Peroxidase AT5G06720 57.065 3.30e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04227 K00430 - gmx:112997600 293.508