Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04226 ATGAACTCTTTTCGTGCGGTAGTCACAGCTGTGTGCTGCGTAGTGGTTGTGCTTGGAGGGCTACCTTACTCCTCAGATGCACAATTAGATCCCTCATTTTATAAGAAAACATGTCCACAGCTGCATTTTATTGTTCATGAAGTCGTATGGAAAGCTTCATTATCTGATCCCCGAATCTTTGCCAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTCCAAGGCTGTGATGCATCGATTTTGTTGAACAACACCGCTACCATTGTGAGTGAACAAGAAGCTTTGCCAAATAACAACTCCATAAGAGGTTTGGATGTTGTGAATAATATCAAGACAGCAGTGGAAAAAGCTTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCATCTTCTGCTCTGGCTTTTGGTCCTTGTTGGAAAGTACCTTTGGGAAGAAGGGATAGTTTAACAGCCAACCGAACCCTTGCTAATATAAACCTTCCAGCTCCTTTCTTCACTCTTGATCAACTTAAAAAAGCTTTTTCGGATCAAGGCCTTGACACTACTGATCTAGTTGCACTGTCAGGTTCAATTTCAGGTGCTCATACATTTGGCAGGGCTCACTGCTCTTTATTCCAAGATCGATTATACAACTTCAACAAAACTGGCAAACCCGATCCAACTCTTGATACAACTTACTTACAAACATTGCGCAAAATCTGCCCCAATGGTGGACCTGGGACTAACCTCGCCAATTTTGACCCAACCACTCCTGATAAACTTGATAAGAACTACTACTCCAATCTTAAAGTTAAAAAGGGCTTGCTTCAAAGTGACCAAGAGTTGTTCTCAACACCCGGTGCAGATACCATTAGCATTGTCAACAAGTTCGCTAGTAGTCAAAATGCTTTCTTTGAGAGCTTTAAGGCTTCCATGATTAAAATGGGTAATATTGAAGTCCTAACTGGGAACAAAGGAGAAATTCGAAAACAATGTAATTTTATTAACAAAAAATCTACTGAACAAGATGAGGGTGGGTTTAGCTCAATCTAA 1047 0.4126 MNSFRAVVTAVCCVVVVLGGLPYSSDAQLDPSFYKKTCPQLHFIVHEVVWKASLSDPRIFASLVRLHFHDCFVQGCDASILLNNTATIVSEQEALPNNNSIRGLDVVNNIKTAVEKACPGIVSCADILALAAEASSALAFGPCWKVPLGRRDSLTANRTLANINLPAPFFTLDQLKKAFSDQGLDTTDLVALSGSISGAHTFGRAHCSLFQDRLYNFNKTGKPDPTLDTTYLQTLRKICPNGGPGTNLANFDPTTPDKLDKNYYSNLKVKKGLLQSDQELFSTPGADTISIVNKFASSQNAFFESFKASMIKMGNIEVLTGNKGEIRKQCNFINKKSTEQDEGGFSSI. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04226 348 Gene3D - 33 334 - -
Seca6g04226 348 FunFam Peroxidase 166 313 - -
Seca6g04226 348 PANTHER PEROXIDASE 72-RELATED 26 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 FunFam Peroxidase 32 176 - -
Seca6g04226 348 Gene3D Peroxidase, domain 2 166 313 - -
Seca6g04226 348 ProSiteProfiles Plant heme peroxidase family profile. 28 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 SUPERFAMILY Heme-dependent peroxidases 28 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 CDD secretory_peroxidase 28 333 IPR033905 GO:0004601|GO:0042744
Seca6g04226 348 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g04226 348 Pfam Peroxidase 47 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04226 Seca-Chr6 110024003 110026214 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04226 11 343 Peroxidase AT5G06730 54.354 6.88e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04226 K00430 - gmx:547499 517.309