Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04217 ATGGCCATAACGCAACGAGCACAATACTTGTTTGGCAGTAATGAATACTATGTCCGAGTGATCAATGGGTTCACAGACAATTCATCTGTGCCTTTGGTGATTTGGTGCTCATCAGAGGAAATGGATCTTGGAGGGCGTGCCTTGCAAGAGCATGATGACTTTAGTTGGACCATGAGGCCCAATTTGTGGAGCAGCAACCAAATGAAGTGCACCATGAAATGGGACAACACAAGGAAGAGTTTTGATGCATTCAAGGCCTCTAGGGACGCTAATCGATGTGGCCCTCATAGGATATGTTATTGGAGGGTCACACAAGATGGCTTTTATTTCAGCAATGATGATGTCAATTGGAGGAAGGACTTCTTATGGTGA 372 0.4489 MAITQRAQYLFGSNEYYVRVINGFTDNSSVPLVIWCSSEEMDLGGRALQEHDDFSWTMRPNLWSSNQMKCTMKWDNTRKSFDAFKASRDANRCGPHRICYWRVTQDGFYFSNDDVNWRKDFLW. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04217 123 Pfam Plant self-incompatibility protein S1 18 123 IPR010264 -
Seca6g04217 123 PANTHER - 15 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04217 Seca-Chr6 109927951 109928322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04217 30 107 Carbohydrate Esterase AT3G16970 31.707 2.00e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04217 - - gmx:100792052 235.728