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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca6g04214
ATGACATATCCCGCTCATGATCCCACAGATAATGAAGCTGATGGACAGCAACAATCAGAACCACGGGTGCATACTTTATTAGAAAATGACATTTCTCATGCAGATACTGGCACTCATAATGTTCAGTATGAAACACCTCCACAGCTTGGAAGTGGGCATGCTATGGCACCCCCTGCTTACCCATATCCATATCCATACTACAGAAACATCTTTGTTCCCTGTTATGCACAACTTTATCCCCCACAACTCTATGGTGGACATCCAATGGTCCATTTTCAGTTAATGGGAGTTCAACAAGCAGGTGTTCCTTTACCAACTGGTGTAGCTGAGAAGCCTGTGTTTGTTAATGCAAAACAATATCATGGTATATTAAGACGCAGGCAGTCCCGTGCTAAAGCTGAATTAAAAAATAAAGCTTCAAGGAATAAGAAGCCATACTTGCATGAATCTCGACATAAAGCAAGAGGATGTGGAGGCCGGTTTCTGAATTCAAAGAAAAGTGAGAATGAACAGGAAGAGGTTGCATCAACTGACAAATCACAATCCAATATAAATCTCAATTCTGATAAAAATGATCTTGCGCCATCAGATAAAACATCCTAA
603
0.4063
MTYPAHDPTDNEADGQQQSEPRVHTLLENDISHADTGTHNVQYETPPQLGSGHAMAPPAYPYPYPYYRNIFVPCYAQLYPPQLYGGHPMVHFQLMGVQQAGVPLPTGVAEKPVFVNAKQYHGILRRRQSRAKAELKNKASRNKKPYLHESRHKARGCGGRFLNSKKSENEQEEVASTDKSQSNINLNSDKNDLAPSDKTS.
201
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca6g04214
200
MobiDBLite
consensus disorder prediction
125
200
-
-
Seca6g04214
200
ProSiteProfiles
NF-YA/HAP2 family profile.
109
164
IPR001289
GO:0003700|GO:0006355
Seca6g04214
200
MobiDBLite
consensus disorder prediction
127
144
-
-
Seca6g04214
200
SMART
cbf3
108
164
IPR001289
GO:0003700|GO:0006355
Seca6g04214
200
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
27
192
IPR001289
GO:0003700|GO:0006355
Seca6g04214
200
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
111
161
IPR001289
GO:0003700|GO:0006355
Seca6g04214
200
ProSitePatterns
NF-YA/HAP2 subunit signature.
114
134
IPR018362
GO:0003677|GO:0016602
Seca6g04214
200
Gene3D
-
109
165
-
-
Seca6g04214
200
PRINTS
CCAAT-binding transcription factor subunit B signature
112
134
IPR001289
GO:0003700|GO:0006355
Seca6g04214
200
PRINTS
CCAAT-binding transcription factor subunit B signature
143
166
IPR001289
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca6g04214
Seca-Chr6
109876364
109878366
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca6g04214
1
200
CCAAT-HAP2 Transcription Factor Family
AT1G30500
47.596
1.90e-52
165
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Seca6g04214
CBFB_NFYA
2.2e-18
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca6g04214
K08064
-
gmx:100809036
303.523
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