Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04211 ATGTTGCAGAAAGTATTTGATCATGACACATTTTCTGCTGATGATATAATGGGAGAAGCGGACATTGATCTTCAGCCGCTGATAACATCTGCTATGGCATTTGGAGATGCTGGAATGTTTGGCGATATGCAGATAGGAAAATGGTTGAAATCTGATGACAATGCACTTGTTGAGGATAGTCCAGTCAATATTATTGATGGTAAGGTTAAACAAATGATTTCACTCAAGCTCCAGAATGTTGAATCTGGAGAAATGGAGCTAGAACTCGAGTGGATTCCTCTTGATCAATAG 291 0.3918 MLQKVFDHDTFSADDIMGEADIDLQPLITSAMAFGDAGMFGDMQIGKWLKSDDNALVEDSPVNIIDGKVKQMISLKLQNVESGEMELELEWIPLDQ. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04211 96 Gene3D C2 domain 2 96 IPR035892 -
Seca6g04211 96 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 96 IPR044518 GO:0005096|GO:0005543
Seca6g04211 96 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 90 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04211 Seca-Chr6 109856915 109857205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04211 4 96 C2H2 Transcription Factor Family AT4G21160 79.570 9.20e-50 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04211 K12486 - gmx:100790876 175.252