Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04208 ATGGGGAAGGTCCTTGGTAATGGACTCTTGATTGTGCTGATTCTGGTGGTGGTGTCGGTGACAGTGAGTACTGTAGAGGCTCAACAAAAGTCATTTCTTATAAATTGTGGTTCAAATTCTTCTGTAAATGTGGATGGTAGGAGATGGATTGGGGACATGGCCCCTGATAGCAATGTCACCCTCAGCTCCCCTGGTGTTGTTGCTTCCACTTCTGCATTAAGTGGCAATTCAAACTATGATCCCCTCTACAAAACAGCCAGAATTTTCACAGCTTCTCTAAATTACACAATCAAAGGAGTTCAGGGAAACTATTTTGTTAGGTTCCATTTCTGCCCCTTTGAGACTGGTGACTATAATGTAAATGAGTCCTCATTTGGTGTTGTGGTCAATGGTCTGAAACTATTGTCTGAGTTTGATGTTCCAGCATTCTTCTTGATTAAAGAGTATATTCTGGCTGTTGATGCTGATATGCTTGTGATTGAGTTTGTTCCAACTGGAAGCTCATTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGGTGAGCTTTTTGGTGGCTCAGTCAGTAAAGTTGGTGGAAGTGGTGGAAGCATAAATTTGAATGGACGTGAGATGGAGACTATGTATAGGTTAAATGTTGGTGGTCCTGAGATTGAATCGAATGAGGATCCAAATCTTTGGAGAACTTGGGAAGTGGATTCTAGCTATATGATCACAGAAAATGCTGGTTCAGCAATTAAGAACAGTTCTAATATTACATATGCTTCCATGAATGATACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCTAACACTCAAGTCTTGGACAAAAGATTTAACATGTCATGGAAATTTGAAGTAGATCCTGATTTTGATTATTTGGTCCGATTGCATTTCTGTGAGCTGATGTATGATAAGTCAAATGAGAGAATATTCAGGATCTACATAAACAACAGGACAGCTGCAGATAATTTTGATATTTTTGTACGAGCTGGAGGGATGAATAAAGCATATCACCAGGATCATTTTGATTCTGCATCATCAAGGATTGACACACTTTGGGTTCAACTGGGTCCTGATACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTCTAGAGATTTTCAAGCTTAGTCGAAATGGTAATCTTGCCTATGTGGAGAGATATAACTCAGCTGACAATTCAGTAAGCAAATCAAAAGCAAGAATTTGGATTGGTATTGGAGCAGGTCTAGCTTCTGTAGCTGTAATTGCATGTATAGTTGTTCTTGTTTTCTGTTTCTGCAGAAAGAGGAAGAAAGAATCAAGTGATACCAAAAACAACTCTCCGGGTTGGCGACCGTTGTTCTTGTATGGAGGGGCTGCTGTAAACAGTACTGTTGGTGCCAAGGGATCAGCAGGTACTCAGAAGTTATATGGATCTGTGGCCTCAACCAGAGTTGGCAAGCGGTTTACATTGGCAGAAATTACTGCAGCAACAAATAACTTTGATGACAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGGGAGATTGAGGATGGTGTCCCTGCTGCAATTAAGCGTGCCAACCCGCAATCTGAGCAAGGTCTAGCTGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGACATAGGCATCTGGTGTCCATGATTGGTTTCTGTGAAGAGAAAAATGAAATGATTCTGGTTTATGAGTACATGGCAAATGGAACTCTTAGAAGTCATCTATTTGGGAGTGATCTCCCTCCATTAACTTGGAAGCAGCGCCTAGAAGCATGCATTGGTGCTGCAAGGGGACTTCACTACCTTCACACAGGAGCTGAACGTGGAATAATTCACAGGGATGTCAAAACAACCAATATACTGTTAGATGAGAATTTTGTAGCCAAAATGTCTGATTTTGGGTTGTCAAAAGATGGTCCTGCATTTGACCATACTCATGTTAGTACTGCTGTGAAAGGAAGTTTTGGCTATCTAGACCCGGAGTACTTCAGAAGACAGCAATTGACTGAGAAATCAGATGTTTACTCTTTTGGAGTTGTGTTGTTTGAAGCTGTTTGTGCTCGAGCTGTGATTAATCCCACCTTGCCTAAAGATCAGATTAACCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCACTTGACAAAATTATTGATCCACATCTTAAAGGAAATTATTGTCCAGAATCCTTGTCTAAGTTTGGGGAGATAGCAGAGAAATGTCTTGCTGATGATGGGAAGAGCCGCCCCACCATGGGGGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTACATGAAGCTTGGCTCAACATGAACAGCACTGGAACTTCTTTCTCTAGTAGTCAAGCTATTAGTGGTCCTAAAGATGGAGGACTAGAAGTGATGCAGGAGCCTTCAAGTCAAGATGAAGAGGTTGGTTTAGATCTCAAACAGACAACTGATGGAGGAGGAGACAAAGAAGTGAATGCTGCAATTTGA 2529 0.4183 MGKVLGNGLLIVLILVVVSVTVSTVEAQQKSFLINCGSNSSVNVDGRRWIGDMAPDSNVTLSSPGVVASTSALSGNSNYDPLYKTARIFTASLNYTIKGVQGNYFVRFHFCPFETGDYNVNESSFGVVVNGLKLLSEFDVPAFFLIKEYILAVDADMLVIEFVPTGSSFGFINAIEIVPVVGELFGGSVSKVGGSGGSINLNGREMETMYRLNVGGPEIESNEDPNLWRTWEVDSSYMITENAGSAIKNSSNITYASMNDTSVAPLLVYETARAMSNTQVLDKRFNMSWKFEVDPDFDYLVRLHFCELMYDKSNERIFRIYINNRTAADNFDIFVRAGGMNKAYHQDHFDSASSRIDTLWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYVERYNSADNSVSKSKARIWIGIGAGLASVAVIACIVVLVFCFCRKRKKESSDTKNNSPGWRPLFLYGGAAVNSTVGAKGSAGTQKLYGSVASTRVGKRFTLAEITAATNNFDDSLVIGVGGFGKVYKGEIEDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSMIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEACIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWAMRWQRQRSLDKIIDPHLKGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMNSTGTSFSSSQAISGPKDGGLEVMQEPSSQDEEVGLDLKQTTDGGGDKEVNAAI. 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04208 842 ProSiteProfiles Protein kinase domain profile. 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g04208 842 PANTHER OS07G0166700 PROTEIN 491 782 IPR045272 GO:0004714|GO:0006468
Seca6g04208 842 SUPERFAMILY Protein kinase-like (PK-like) 483 777 IPR011009 -
Seca6g04208 842 FunFam receptor-like protein kinase FERONIA 470 580 - -
Seca6g04208 842 Gene3D Transferase(Phosphotransferase) domain 1 581 795 - -
Seca6g04208 842 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Seca6g04208 842 Gene3D - 204 388 - -
Seca6g04208 842 Gene3D - 27 180 - -
Seca6g04208 842 Pfam Protein tyrosine and serine/threonine kinase 510 772 IPR001245 GO:0004672|GO:0006468
Seca6g04208 842 CDD STKc_IRAK 511 776 - -
Seca6g04208 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Seca6g04208 842 MobiDBLite consensus disorder prediction 796 842 - -
Seca6g04208 842 Pfam Malectin-like domain 34 385 IPR024788 -
Seca6g04208 842 FunFam Receptor-like protein kinase FERONIA 581 794 - -
Seca6g04208 842 FunFam Receptor-like protein kinase FERONIA 205 388 - -
Seca6g04208 842 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g04208 842 Gene3D Phosphorylase Kinase; domain 1 469 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04208 Seca-Chr6 109833974 109836556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04208 11 821 Receptor kinase-like Gene Family AT1G30570 64.346 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca6g04208 Malectin_like 5.4e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04208 - - gmx:100791403 1409.43