LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g04165	ATGGCGATCATTGAGACAGGTTCAGTGTGGGTGGCCTTAGTTGCCATAGCTGGTGGTGTTTTGGTCCTAAGATGGCTCCTCAAGAATGTGAATTGGTGGCTCTATGAAGCCAAACTGGGAGACAAACAGTACTATTTGCCCCCAGGTGACATGGGCTGGCCCGTTATTGGAAACATGTGGTCCTTCCTTAGAGCTTTCAAGACTGGTAACCCAGACTCCTTCATGGCCTCCTTTGTCTCCAGGTTTGGAAAGACTGGCATATACAAGGTGTTCATGTTTGGGAACCCAAGTGTGATTGTGACAACACCTGAAGGATGCAGAAAAGTTCTAACAGATGATGAAAAATTCACACCTGGGTGGCCTCGCTCCACAGTAGAGCTCATTGGAGAGAAGTCATTCATTTCAATGTCTTATGAAGAACATAGACGCCTTAGACGTTTGACATCTTCTTCCATCAATGGCTATGAAGCACTCACTGTGTACTTGAAATATATAGAAGAAATTGTGATAACTTCATTGGAGAAATGGACCAAGATGGGAGAAATTGAGTTTTTAACTCAGATGCGGAAGCTTACTTTTAAAATCATTATCCATATTTTCCTTGGAGTAGAAAGTGACCCTATTATGGAGGCTTTGGAAAAAGAATACACAACACTCAATCTTGGAGTTAGAGCCATGAGAATTAATATTCCTGGATTTGCATTCCATAAAGCACTCAAGGCAAGGAAAAATCTATTGGCCATATTCCAAGGTATTGTGGATAGGAGGAGAAAAGAAAGGAAGGAAAATTTACACACCAAAAAAGCCAAAGATATGATGGATGCTCTGATAGATGCTGAAGATGAAAATGGAAGAAAATTGGGTGATGATGACATCATTGATATCATGTTGATGTACTTAAATGCGGGTCATGAATCTTCAGGACATGTTACCATGTGGACTACCTATTACCTGCAAAAGCATCCAGAATATTTCAAAAAGGCTAAGGAAGAACAAGAGGAAATACTAAGGAGAAGGCCTCCAACACAGAAAGGGTTGAAACTGGAGGAAGTTCGCCAGATGGAGTATCTTTCTAAGGTGATTGATGAAACAATGCGTTTGATTACATTCTCACTCGTGGTCTTTCGGGAGGCAAAATCCGATGTCAATATCAATGGTTACATCATTCCAAAGGGTTGGAAAGCTTTGGTCTGGTTCAGGTCCGTTCACCTTGATCCTGAAATATATCCCAACCCAAAGGAGTTTAATCCTGAGAGATGGAATGAGGTACACAAGGCTGGAGAATTCCTTCCATTTGGAGCAGGAACTAGATTGTGCCCTGGGAATGATCTTGCCAAGCTGGAAATCTCAGTTTTCCTTCATCATTTTCTTCTGAATTATGAGCTTGAACAACTGAATCCAAAATCTCCTGTGAGATTCTTACCTCATACAAGGCCCATGGACAATTGCTTGGCAAGGATCAAGAAACGTTCATCTGCATAA	1482	0.415	MAIIETGSVWVALVAIAGGVLVLRWLLKNVNWWLYEAKLGDKQYYLPPGDMGWPVIGNMWSFLRAFKTGNPDSFMASFVSRFGKTGIYKVFMFGNPSVIVTTPEGCRKVLTDDEKFTPGWPRSTVELIGEKSFISMSYEEHRRLRRLTSSSINGYEALTVYLKYIEEIVITSLEKWTKMGEIEFLTQMRKLTFKIIIHIFLGVESDPIMEALEKEYTTLNLGVRAMRINIPGFAFHKALKARKNLLAIFQGIVDRRRKERKENLHTKKAKDMMDALIDAEDENGRKLGDDDIIDIMLMYLNAGHESSGHVTMWTTYYLQKHPEYFKKAKEEQEEILRRRPPTQKGLKLEEVRQMEYLSKVIDETMRLITFSLVVFREAKSDVNINGYIIPKGWKALVWFRSVHLDPEIYPNPKEFNPERWNEVHKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLNYELEQLNPKSPVRFLPHTRPMDNCLARIKKRSSA.	494

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g04165	493	Pfam	Cytochrome P450	47	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	PANTHER	CYTOCHROME P450 26	43	475	-	-
	Seca6g04165	493	Gene3D	Cytochrome P450	37	490	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	FunFam	Ent-kaurenoic acid oxidase	37	490	-	-
	Seca6g04165	493	PRINTS	P450 superfamily signature	439	450	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	PRINTS	P450 superfamily signature	302	319	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	PRINTS	P450 superfamily signature	359	370	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	PRINTS	P450 superfamily signature	430	439	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca6g04165	493	CDD	CYP90-like	79	489	-	-
	Seca6g04165	493	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	432	441	IPR017972	GO:0005506\|GO:0016705

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g04165	Seca-Chr6	109387364	109391296	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g04165	3	489	Cytochrome P450	AT2G32440	64.959	0.0	684

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g04165	K04123		-	gmx:100781238	789.26

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