Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04145 ATGGAAGAGACATTTGTTCCATTTCGTGGAATAAAAAATGATCTTAAAGGGAGATTGATGTGTTACAAGCAAGACTGGATTGGTGGTCTCACGGCAGGCTTCAGGATATTAGCCCCTACCACATATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTTGGAGAACAATTGGAAAGAGATACAGATGGAATACTCACTGCAGTGCAAACATTAGCATCCACTGCATTGTGTGGAATTATACACTCTATTATAGGAGGCCAGCCTTTGTTGATTCTTGGGGTAGCAGAACCAACTGTAATTATGTATACTTTCATGTTCAACTTTGCAAAAAACAGACCAGAATTGGGTTCAAAGCTTTTTCTAGCTTGGACAGGATGGGTATGCATATGGACTGCCATCTTGTTGTTCCTACTGGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCACTCGCCTAGCAGGGGAACTGTTTGGCCTTCTTATTGCAATGCTCTTCATGCAAGAGGCTATTAGAGGACTCATTAATGAGTTTCATATACCTGAGAGAGCAGACTTAACGTCAACTGAGTTTCAATCTTCATGGAGATTTGGAAATGGCATGTTTGCTTTGATTCTGTCCTTTGGCCTTCTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGATATGGATCTGGATGTTTACGGGGCTTCATAGCAGATTATGGTGTCCCCTTGATGGTTCTATTATGGACTGCTATTTCTTATATACCAGCTGGAAGTATTCCTAAAGGAATCCCTAGGCGCCTATTCAGTCCAAATCCTTGGTCCCCTGGTGCATATGAAAACTGGACTGTCATAAAGGACATGCTGAATGTGCCAGTTCTCTATATTATTGGAGCGTTTGTTCCAGCGACAATGATTGCTGTGCTTTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCATCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTTTAATTGGAATTCCACCATCAAATGGTGTCATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGCTACTTAGGAACCGGCTTGTTGCAAAAGCTCGAAGTTGTATGGGAAAGCAAGAAAGCTTGGGACAAATTTATAGAAGTATGCAAGATGCTTACTGGCAGATGCAAACTCCTCTAATTCACCAGGAACCTTCCTCTCGGGGATTAAAAGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCATGGAGAATATAAATACTCCAGTTGATGAGTCAATATTTGATGTTGAGAAGGAAATTGATGACTTACTGCCTGTTGAGGTTAAAGAACAACGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGTGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTACTGTGGGGTTATTTTGCTTTCATGGCCATTGAAAGCTTACCTGGCAACCAGTTCTGGGAAAGGATTTTGTTAATGTTCACTGCCCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAACTTATGTGGAAACAGTACCTTTCAAGACAATTGCAGTATTTACACTCTTCCAGACTGCTTACTTGCTGGTTTGTTTTGGTATCACTTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGTTGATCATGCTTCTAGTCCCTGTAAGACAATACATTTTGCCCAAGCTCTTCAAAGGAGCACACCTTCAAGATTTAGATGCTGCAGAATATGAGGAAGTCCCAGCTTTACCATTCGAGCTAGCTACTGAAGGGGACTTGAGTAGGTCAGCTTCCTTTGCAGATGATGGAGAGATTCTAGATGGATTTGTTACTAGAAGCCGGGGTGAGGTTCGACGAGTTTGCAGTCCAAAGGTGATGAGCTCCACTGCAACCCCATCCAAAGAGTTAACAGGTCTTCAAAGTCCAAGGTTCCCAGATAAAGTATACAGCCCTAGGGTAAACCAACTAAGAGGAAATAACAGCCCTCGAGGTGTTGGGAGAGGACCATTTAGCCCTGGAGAAGCAAAGCCATCTAATTTGAGGAAATGTGGTTGA 2136 0.4195 MEETFVPFRGIKNDLKGRLMCYKQDWIGGLTAGFRILAPTTYIFFASAIPVISFGEQLERDTDGILTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRPELGSKLFLAWTGWVCIWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQEAIRGLINEFHIPERADLTSTEFQSSWRFGNGMFALILSFGLLLTALRSRKARSWRYGSGCLRGFIADYGVPLMVLLWTAISYIPAGSIPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPVLYIIGAFVPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGFMVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVAKARSCMGKQESLGQIYRSMQDAYWQMQTPLIHQEPSSRGLKELKESTIQLASSMENINTPVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWERILLMFTAPSRRYKVLEECHATYVETVPFKTIAVFTLFQTAYLLVCFGITWVPIAGVLFPLLIMLLVPVRQYILPKLFKGAHLQDLDAAEYEEVPALPFELATEGDLSRSASFADDGEILDGFVTRSRGEVRRVCSPKVMSSTATPSKELTGLQSPRFPDKVYSPRVNQLRGNNSPRGVGRGPFSPGEAKPSNLRKCG. 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04145 711 MobiDBLite consensus disorder prediction 650 711 - -
Seca6g04145 711 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Seca6g04145 711 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016020
Seca6g04145 711 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Seca6g04145 711 PANTHER ANION EXCHANGE PROTEIN 2 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca6g04145 711 MobiDBLite consensus disorder prediction 651 665 - -
Seca6g04145 711 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04145 Seca-Chr6 109196549 109202583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04145 1 695 Antiporters AT3G62270 77.730 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04145 K24194 - gmx:100795777 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04145 6 109196549 109202583 Seca6g04145 6 109196549 109202583 ECH