Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04090 ATGGGCCAGGGCCACAGTTTCAAGGACACATCTCCCAACATTGAAACAAAGTCCACTTCTTTCGAGGCTCATCCCCCAGAGGAGGGAAGCCAATTCTTAGACCCTAAGAACTCATTCTCCCATCCTCCATCTGAAGCACCCCAGAATCCCACATCGGAAGGAGGCTCTGGTCATTCCAAATCCTTCTCTGCTGCTTTCTCAGACATCCTCAAAGGATCCTTACGTGGCCACTCGTTGACAATGCCTCAAAATATCAAAACAGAAAACAAACAAATCAAAGATGAAGTGGAAAAGATATGTGCCCACACAGATTACCCTGATGTTTGCATTTCCACCATTCCACCTTTGCTAAACTTAAACAAAAAGTTTGATGTGATAGATGTTCTTGAAGCTGCCATAAAGGCTTGCTCCCAGCAGATAAAGTTGACCATATCAAAGTTTGAGAAGCATTCTTTTAAATCATCAGAGATTGCTGCTGCACTCACTGATTGCAGGGAACTGTATTTTAACGCTTTGGGAAACCTTCAGAGAGCAATAGATGCATGCCCATCTCGTGATTTTGGAACCGTTACTGTCATGCTTAGTGCTGTTATGGCGGATGTTTCCACATGTGAAAGTGGGTTTGAGGATCTGAAATCACCATCATCAATCACGTCTGAGAATGATGGTTTAGTTAGCATTACGGTCAGCAATTGCCTTTCAATTGCTGCTTTGATTCCCTATTAA 726 0.4325 MGQGHSFKDTSPNIETKSTSFEAHPPEEGSQFLDPKNSFSHPPSEAPQNPTSEGGSGHSKSFSAAFSDILKGSLRGHSLTMPQNIKTENKQIKDEVEKICAHTDYPDVCISTIPPLLNLNKKFDVIDVLEAAIKACSQQIKLTISKFEKHSFKSSEIAAALTDCRELYFNALGNLQRAIDACPSRDFGTVTVMLSAVMADVSTCESGFEDLKSPSSITSENDGLVSITVSNCLSIAALIPY. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04090 241 PANTHER PECTINESTERASE INHIBITOR-LIKE 95 235 - -
Seca6g04090 241 Gene3D Invertase/pectin methylesterase inhibitor family protein 93 240 IPR035513 -
Seca6g04090 241 Pfam Plant invertase/pectin methylesterase inhibitor 95 235 IPR006501 GO:0004857
Seca6g04090 241 CDD PMEI-like_2 94 239 - -
Seca6g04090 241 MobiDBLite consensus disorder prediction 1 61 - -
Seca6g04090 241 NCBIfam pectinesterase inhibitor domain 89 235 IPR006501 GO:0004857
Seca6g04090 241 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 94 239 IPR035513 -
Seca6g04090 241 SMART PMEI_2 91 235 IPR006501 GO:0004857
Seca6g04090 241 MobiDBLite consensus disorder prediction 1 25 - -
Seca6g04090 241 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04090 Seca-Chr6 108597066 108597791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04090 100 218 Carbohydrate Esterase AT1G23200 27.692 2.17e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04090 - - aprc:113852243 242.276