Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04088 ATGGACTCCCAGAAGGAGGTGATAGTAGGAAAGGTATGTGAAATCTATGACAAAATCTCTAGGTTAGGAGACCTCAATCCCTCAAAGCAGGTCAATAACCTCTTTACCCAACTTGTAACTATTTGCACCTCCCCATGTCAATTAGATGTTACTCAGCTCTCCCAAGAAGTTAAAGAAACTATAGCTAAGCTTATTAGACTTTGTGGGAAAGCTGAGGGACTTCTTGAGAATCATTACTCTGCTCTCATAGGGTCTTATGAGAATCCATTAAACCACATCAAACTCTTCCCTTACTACTCCAATTACCTCAAACTTAGCCATTTGGAATTCACTATGCTCACCACACACTGCACTCAAATTCCTGCTCAACTTGCCTTTGTTGGCTCTGGTCCACTTCCTCTTACCTCAATCATGTTGGCCACCTATTTCATGAGGCACACATGCTTTCACAACTACGATATGGATCCATCAGCAAATGCCAAAGCTTATGACTTGATCTCATCAGACCCTGACTTGTCAAAAAGAATGTTCTTCCACACTACTGATATTGCAGATGTGTCAAATGGCCTTAAGGAGTACAATGTTGTCTTCTTAGCAGCACTGGTAGGAATGGACCAGAAGGAGAAAACTGAAGTTATCAATCACTTAGCTAAACATATGGCTCCTGGAGCTATTCTGTTGCTGAGGAGTGCACATGGAGCTCGAGCATTCCTCTATCCAGTGGTTGATCCTTCTGATCTAAAAGGTTTTGAAGTTCTATCAGTTTTTCACCCAACTGATGAGGTTATAAATTCAGTTATTATTGCTAGAAAGCATTCAGTGAATCAGGGGCTTTACTCTCCAGTACTGTCTAGCAAATGCCATGAAATTGAAGGTTTTAATCCCTTAAACCATGGCAACGTTATGGATGAGTTGACCGTTGATGAGCAGGCTTGA 936 0.4145 MDSQKEVIVGKVCEIYDKISRLGDLNPSKQVNNLFTQLVTICTSPCQLDVTQLSQEVKETIAKLIRLCGKAEGLLENHYSALIGSYENPLNHIKLFPYYSNYLKLSHLEFTMLTTHCTQIPAQLAFVGSGPLPLTSIMLATYFMRHTCFHNYDMDPSANAKAYDLISSDPDLSKRMFFHTTDIADVSNGLKEYNVVFLAALVGMDQKEKTEVINHLAKHMAPGAILLLRSAHGARAFLYPVVDPSDLKGFEVLSVFHPTDEVINSVIIARKHSVNQGLYSPVLSSKCHEIEGFNPLNHGNVMDELTVDEQA. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04088 311 PANTHER NICOTIANAMINE SYNTHASE 3 3 289 IPR004298 GO:0030410|GO:0030418
Seca6g04088 311 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Seca6g04088 311 Pfam Nicotianamine synthase protein 2 274 IPR004298 GO:0030410|GO:0030418
Seca6g04088 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04088 Seca-Chr6 108587940 108588875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04088 1 288 Nicotianamine Synthase Gene Family AT1G09240 56.000 2.54e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04088 K05953 - gmx:100814069 509.605