Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04065 ATGGAACGACTAACTGCGAAAAACCCTAGCCGGACAGCATCGCATTTTCAGATTGTGTTAGGGTTCGTCACTTCAATTTCTATCGCAATTTTCCCTTTTTGTTTTGCCCCTTCGGATCATCTTCTAATTTTGCATGCGTTGATTGCAGAGATGGCAAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAGAAGCCTAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTCCTGAGGAACCAGAGGTACGCAAGGAAGCACAACAAGAAGAATGGTGAAGCAGCCACGGAGGAAGAGTAA 336 0.4732 MERLTAKNPSRTASHFQIVLGFVTSISIAIFPFCFAPSDHLLILHALIAEMAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYARKHNKKNGEAATEEE. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04065 111 Gene3D - 51 111 - -
Seca6g04065 111 MobiDBLite consensus disorder prediction 56 111 - -
Seca6g04065 111 Pfam Ribosomal L29e protein family 53 92 IPR002673 GO:0003735|GO:0005840|GO:0006412
Seca6g04065 111 PANTHER 60S RIBOSOMAL PROTEIN L29 51 109 IPR002673 GO:0003735|GO:0005840|GO:0006412
Seca6g04065 111 MobiDBLite consensus disorder prediction 60 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04065 Seca-Chr6 108385799 108386937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04065 51 111 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 2.46e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04065 K02905 - csin:114294630 130.183