Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04054 ATGGGAGTTGAAAAAGAAGGAACAAAAAGTGGAGGATATGTTGGTGGTTTTTTTCAGTTGTTTGATTGGACCTCAAAATCCCGTAAAAAATTATTTGCATCCAAGTCAGATATACCAGAGCCTTTGAAACAGGAAAGAAAAGTCGATTACAATGTGGCAATGACACGGCACTTTTTGGTGGATGAAGATGAAAATGGAGTTGGGGCAAGTGTTAGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATGTGGAACAAGAGCCCCTAGTGTAGTTGCCAGACTTATGGGATTAGATTCCTTGCCTCCTTCCAGTTTTTCTGATCCATATTCTACCCCATTTTTGGATACCCGATCCCTTCAAGATGCTCAGTTCTTCAGGAAAAACCCCAGTCATCAATATGACCATCAAACTCTATATTCTGGAAAGTTGGTTGAAAAGGTTGAAGGCTCTTCTAGGAACTTTATGGAGCCAAAGCCTCAAAAGACCATTACTAGGCCAATTGAAAAGTTCCAAACAGAAGTATTACCTCCAAAATCAGCTAAAACAATTCCTGTTACACACCATAAACTTTTATCCCCCATTAAGAGTCCTGGATTTATTCCAACCAACAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAACCTGGATCCCAAATTAGTACAAAGGCTAAAACACCTCTAGTAGGATCATCGACAGTATCATTGAGGGTCAAAGATCTTAAAGATAAGTTGGAGTCTTCGCAAAAAGGACCTCTGATTGCGTCATCTTCCATGGCTTCTCGAGCTCGAGAGCTTAAAGAAAGAAGAGAAATTTCTCATAGAACCGCCAGGCTTTCAGAACCTTCTCAAAGGTCAGTTGAGTCAAATGCTGTTAAGTATCTAAAGGGACAATCTTTAAACAGAAGCTGGAATGGATCTGTGGATACATCCATCAGATCTCCTGCACATGCAGAGGAAGATTCTTCATTGAAAAATAAGGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAGAAAAGGGAAGGTTTGAGTTTGACTGGTGGCAGAAGTTTGACAGGCCAAAAGGAGCATCTTGACATGAAATCCAACCAGCCCTCGAAGGCAAACCAACCATCAAAGGCAAATAAATCTTCTGGTCAGAATTCTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATTATTCAATTGATAAAGACAAATTATCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGGAAAGTTCTGACTGGGGATTCCTCTCATGGACGTCATAGAAGCTCTAGTAGTAAGTCCATTGCAAAATCTAAAGTTGGGTCCAGAAAGTCAGCCATTGAGGTGACAGATAGTGAAAAGGAAGTTTTATATACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGATTGGAATGATAGGGTTGTGGATAATTTGTTCATTGATAAAACCCAGAAGCCTGTTAAGTCTAATCTAGTTAGTAATAAACAGTATGGTTGGGCTGAAGAAGTCAAAAAGAAAGACATGGATGTGGTTTCCTTCACATTTACCACACCATTAACTAGGAGCAATCCAGGTTTTGAGGAATCTGGACAGGCTGGCCAGAATAGTAATGGTCTTTCCTTGGATCAACGATTTAAAAGAGTGTTGCTTGACACAGACAATACAAGGTCTCCAATAGGATACAATGTGATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTAACACATGTAGTTGATACCTCTTGCAATGATGGTTCTAAAGTGAGGCAACCTTCCATTACTGCACCAATGTCAGAGGAACAAGTAACCAACCTTAATATCCTCAATCCAAGATTGCAACATAAGAAAGACCAAGATATGTTATTTACAGACAAGTTAAGCAGTAGCCATGATTCTGACATCTCCTTCACCAGTCTTCCTGAATTATCAATGAAACATAGCTCATGGTTGGTCATTAACTCAAGATGTTTACAGGTTGATGAGGTAGAACCACAGTTATTCAATTGCCGACATCCAAGTCCAATCTCTGTTCTTGAGCCTTCCTTTTCAATTGAAAGCTGTGAATCTTCAGCTAGTGCTGATTTTACTAGTACAGAAGGAAGCAAGTTGTGTTCTTCTGTTCAAGGTCAGGAGGTTGTTCATGGCTTTAATTTTTCAAGGAAGTTCTGTCCTACTGAATCTGATATGGAGTTATCTGATTCAGCTTCTTCAAGTACATTGTCTGTCATGAAGTTTGGAAGATCAAGGACATGGGAGTTGGACTATGTGAAAGATATTTTGTGTAATGTTGAGTTGATGTATATGGACTTTTCTGTTGGTAGAGCACGTGAGATTGTAAACTCTCATCTATTCAACCAGTTGGAAAGCAGAAAGGGAGGGTTTAGGAGTGATGATGAATCTAGGATAAGAAGGAAAGTTATGTTTGATTGTGTGAGTGAATGTATGGACTTGAGATGCAAGCCTTATGTAGGGGGAGGATACAAAATGTGGACCAAAGGGGTTGCAATGGTGAAAAGAAAGGAATGGTTGGCAGAAGATGTGTACAAGGAGATTTCAAGTTGGACAGGGATGGGAGATTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATGGAAGATGGCTAGATTTTGAGGTTGATGCTTTTGAACTGGGAGCAGAGGTGGTGGACCAAATATTCAATTCTTTAGTTGATGATGCTGTCACTGAATTCTTGCAATTGTAA 2799 0.3984 MGVEKEGTKSGGYVGGFFQLFDWTSKSRKKLFASKSDIPEPLKQERKVDYNVAMTRHFLVDEDENGVGASVRGSCDHSYASSVTDDEACGTRAPSVVARLMGLDSLPPSSFSDPYSTPFLDTRSLQDAQFFRKNPSHQYDHQTLYSGKLVEKVEGSSRNFMEPKPQKTITRPIEKFQTEVLPPKSAKTIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPGSQISTKAKTPLVGSSTVSLRVKDLKDKLESSQKGPLIASSSMASRARELKERREISHRTARLSEPSQRSVESNAVKYLKGQSLNRSWNGSVDTSIRSPAHAEEDSSLKNKGKSVSLAIQAKVNVQKREGLSLTGGRSLTGQKEHLDMKSNQPSKANQPSKANKSSGQNSSGVLRQNNLKQNYSIDKDKLSSKPLVSNSQGRKVLTGDSSHGRHRSSSSKSIAKSKVGSRKSAIEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIDKTQKPVKSNLVSNKQYGWAEEVKKKDMDVVSFTFTTPLTRSNPGFEESGQAGQNSNGLSLDQRFKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTHVVDTSCNDGSKVRQPSITAPMSEEQVTNLNILNPRLQHKKDQDMLFTDKLSSSHDSDISFTSLPELSMKHSSWLVINSRCLQVDEVEPQLFNCRHPSPISVLEPSFSIESCESSASADFTSTEGSKLCSSVQGQEVVHGFNFSRKFCPTESDMELSDSASSSTLSVMKFGRSRTWELDYVKDILCNVELMYMDFSVGRAREIVNSHLFNQLESRKGGFRSDDESRIRRKVMFDCVSECMDLRCKPYVGGGYKMWTKGVAMVKRKEWLAEDVYKEISSWTGMGDSMVDELVDKDMSSQYGRWLDFEVDAFELGAEVVDQIFNSLVDDAVTEFLQL. 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04054 932 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 928 - -
Seca6g04054 932 MobiDBLite consensus disorder prediction 310 337 - -
Seca6g04054 932 MobiDBLite consensus disorder prediction 270 286 - -
Seca6g04054 932 MobiDBLite consensus disorder prediction 415 430 - -
Seca6g04054 932 Pfam DUF761-associated sequence motif 81 112 IPR032795 -
Seca6g04054 932 Pfam Domain of unknown function (DUF4378) 774 924 IPR025486 -
Seca6g04054 932 MobiDBLite consensus disorder prediction 353 459 - -
Seca6g04054 932 MobiDBLite consensus disorder prediction 255 297 - -
Seca6g04054 932 MobiDBLite consensus disorder prediction 375 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04054 Seca-Chr6 108269914 108274897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g04054 15 930 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.250 1.57e-95 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04054 - - gmx:102669513 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04054 6 108269914 108274897 Seca6g04054 6 108269914 108274897 ECH
Seca6g04054 6 108269914 108274897 Seca6g04054 6 108269914 108274897 PCT